RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MID2Q9UJV3 735 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 CFAP73A6NFT4 308 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 SDC4P31431 198 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 CASP2P42575 452 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 SMAD1Q15797 465 aaKnown RBP14.58□□□□□ -0.08
VCP-201ENST00000358901 JAMLQ86YT9 394 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 KIF22Q14807 665 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 TRIM72Q6ZMU5 477 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 SPATA21Q7Z572 469 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 SKA2Q8WVK7 121 aaPredicted RBP14.58□□□□□ -0.08
VCP-201ENST00000358901 MTRQ99707 1265 aa14.58□□□□□ -0.08
VCP-201ENST00000358901 KLHL8Q9P2G9 620 aaPredicted RBP14.58□□□□□ -0.08
VCP-201ENST00000358901 CHORDC1Q9UHD1 332 aaPredicted RBP14.58□□□□□ -0.08
VCP-201ENST00000358901 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 GOLGA8RI6L899 631 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 CDH16O75309 829 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 YWHABP31946 246 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.088e-7■■■■□ 19.9
VCP-201ENST00000358901 MDM2Q00987 491 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 SLC12A1Q13621 1099 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 KLHDC7AQ5VTJ3 777 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 TTI2Q6NXR4 508 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 RAB44Q7Z6P3 723 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 SP8Q8IXZ3 490 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 WRNIP1Q96S55 665 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 RPA1P27694 616 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 STAT4Q14765 748 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 C1orf146Q5VVC0 180 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 WDR93Q6P2C0 686 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 XPO6Q96QU8 1125 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 SERPINI1Q99574 410 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 TTC1Q99614 292 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 LRRIQ3A6PVS8 624 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 F5H423 210 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 TBX3O15119 743 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 PHF2O75151 1096 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 ANKRD20A4Q4UJ75 823 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ANKRD20A8PQ5CZ79 823 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ANKRD20A2Q5SQ80 823 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ANKRD20A1Q5TYW2 823 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 GJB7Q6PEY0 223 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 LRIG3Q6UXM1 1119 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 CPA5Q8WXQ8 436 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 RBM15Q96T37 977 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■□□□ 12.7
VCP-201ENST00000358901 UVRAGQ9P2Y5 699 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 LPXNO60711 386 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 PFDN1O60925 122 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 LMNAP02545 664 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 MYBL1P10243 752 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 COMTP21964 271 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 KLRK1P26718 216 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 COPB2P35606 906 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ERFP50548 548 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 SATB1Q01826 763 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 PLCB4Q15147 1175 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 FAM102AQ5T9C2 384 aaPredicted RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 CDKAL1Q5VV42 579 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 LRRN4CLQ8ND94 238 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 FAM161BQ96MY7 647 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 TRIM56Q9BRZ2 755 aaKnown RBP14.57□□□□□ -0.08
VCP-201ENST00000358901 ERP44Q9BS26 406 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ZNF302Q9NR11 478 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 NAGPAQ9UK23 515 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.08
VCP-201ENST00000358901 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
VCP-201ENST00000358901 ADAMTS13Q76LX8 1427 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 M0QYV0 167 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 SLC37A4O43826 429 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ESRRGP62508 458 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 NOP14P78316 857 aaKnown RBP14.56□□□□□ -0.08
VCP-201ENST00000358901 OCRLQ01968 901 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
VCP-201ENST00000358901 KYNUQ16719 465 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 RHPN2Q8IUC4 686 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 BBS5Q8N3I7 341 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 YIPF3Q9GZM5 350 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ISCUQ9H1K1 167 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 TRABDQ9H4I3 376 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ARL2BPQ9Y2Y0 163 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ESYT2A0FGR8 921 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ACOT2P49753 483 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 RAD23BP54727 409 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 CDH6P55285 790 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 ITPK1Q13572 414 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 HIF1AQ16665 826 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 MUM1L1Q5H9M0 696 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 GRAMD1AQ96CP6 724 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 FAM167AQ96KS9 214 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 TSC22D3Q99576 134 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 PARVAQ9NVD7 372 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 KBTBD4Q9NVX7 518 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms