RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SEZ6Q53EL9 994 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 ANKRD40Q6AI12 368 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
CCNE1-202ENST00000357943 C11orf57Q6ZUT1 292 aaPredicted RBP16.25■□□□□ 0.19
CCNE1-202ENST00000357943 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 SMG8Q8ND04 991 aaKnown RBP16.25■□□□□ 0.19
CCNE1-202ENST00000357943 ZSWIM2Q8NEG5 633 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 P2RX5Q93086 422 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 MED15Q96RN5 788 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 NXF3Q9H4D5 531 aaKnown RBP16.25■□□□□ 0.19
CCNE1-202ENST00000357943 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 CEP290O15078 2479 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 ABHD14A-ACY1A0A1B0GW23 586 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 FAM189A1O60320 539 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 ACTN1P12814 892 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 GARTP22102 1010 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 CCNE1P24864 410 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
CCNE1-202ENST00000357943 DCAF4L1Q3SXM0 396 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 SLFN12LQ6IEE8 588 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 THNSL1Q8IYQ7 743 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 EEF2KMTQ96G04 330 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 MSTO1Q9BUK6 570 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 CXXC1Q9P0U4 656 aaPredicted RBP16.24■□□□□ 0.19
CCNE1-202ENST00000357943 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
CCNE1-202ENST00000357943 IPPQ9Y573 584 aa16.24■□□□□ 0.19
CCNE1-202ENST00000357943 MEIS3P2A8K0S8 358 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 CALUO43852 315 aaPredicted RBP16.23■□□□□ 0.19
CCNE1-202ENST00000357943 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 MCF2P10911 925 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
CCNE1-202ENST00000357943 OSTNP61366 133 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
CCNE1-202ENST00000357943 FAM189BP81408 668 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 GOLGA5Q8TBA6 731 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 SAAL1Q96ER3 474 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 GDF15Q99988 308 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 C1orf112Q9NSG2 853 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 HSPBP1Q9NZL4 362 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
CCNE1-202ENST00000357943 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 OGTO15294 1046 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 ZNF623O75123 536 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 NR3C1P04150 777 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 TNFSF9P41273 254 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 CYP2J2P51589 502 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 DEFB103AP81534 67 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 C9orf50Q5SZB4 431 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 FAM43BQ6ZT52 329 aaPredicted RBP16.23■□□□□ 0.19
CCNE1-202ENST00000357943 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 LPPQ93052 612 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 APOL6Q9BWW8 343 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 SNTG2Q9NY99 539 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 RWDD2AQ9UIY3 292 aa16.23■□□□□ 0.19
CCNE1-202ENST00000357943 GOLGA8IPA6NC78 632 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 GOLGA8JA6NMD2 632 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 EFCAB14O75071 495 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 STAG3L1P0CL83 205 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 NR2F2P24468 414 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 AKAP5P24588 427 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 ACOT2P49753 483 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 RAB27AP51159 221 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 EDRF1Q3B7T1 1238 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 CRELD2Q6UXH1 353 aaPredicted RBP16.22■□□□□ 0.19
CCNE1-202ENST00000357943 TMCO2Q7Z6W1 182 aaPredicted RBP16.22■□□□□ 0.19
CCNE1-202ENST00000357943 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
CCNE1-202ENST00000357943 CRIPAKQ8N1N5 446 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 RNF169Q8NCN4 708 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
CCNE1-202ENST00000357943 TMEM174Q8WUU8 243 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 HERVK_113Q902F9 699 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 TSG101Q99816 390 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 DUSP9Q99956 384 aaKnown RBP16.22■□□□□ 0.19
CCNE1-202ENST00000357943 FAM213AQ9BRX8 229 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 DMAC2Q9NW81 257 aa16.22■□□□□ 0.19
CCNE1-202ENST00000357943 CDH23Q9H251 3354 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 SKIP12755 728 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 ERCC5P28715 1186 aaPredicted RBP16.21■□□□□ 0.19
CCNE1-202ENST00000357943 GRM5P41594 1212 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 ADAM9Q13443 819 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 NFIL3Q16649 462 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 AGMOQ6ZNB7 445 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 APBB1IPQ7Z5R6 666 aaPredicted RBP16.21■□□□□ 0.19
CCNE1-202ENST00000357943 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
CCNE1-202ENST00000357943 SLC9A9Q8IVB4 645 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
CCNE1-202ENST00000357943 CPSF3Q9UKF6 684 aaKnown RBP16.21■□□□□ 0.19
CCNE1-202ENST00000357943 MICAL3Q7RTP6 2002 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms