RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 NMRK2Q9NPI5 230 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 SRP68Q9UHB9 627 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MAP3K5Q99683 1374 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 RNF103-CHMP3A0A140T963 221 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 PRODHO43272 600 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MBL2P11226 248 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 SERPINB3P29508 390 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 STIP1P31948 543 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 PLTPP55058 493 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 UVSSAQ2YD98 709 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 EFHC2Q5JST6 749 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 C10orf120Q5SQS8 335 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 LINS1Q8NG48 757 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 NEK7Q8TDX7 302 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 FAM162AQ96A26 154 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MPP4Q96JB8 637 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 DHX35Q9H5Z1 703 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 EXOSC4Q9NPD3 245 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 OLFML3Q9NRN5 406 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 YTHDC2Q9H6S0 1430 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 LINC00854A0A1B0GVQ3 168 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 TRAPPC3O43617 180 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 CUTAO60888 179 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 TOMM70O94826 608 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 NEK2P51955 445 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 NCKAP1LP55160 1127 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 FCGRTP55899 365 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 STXBP1P61764 594 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MKRN4PQ13434 485 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MMGT1Q8N4V1 131 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 PIGSQ96S52 555 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 FAM213AQ9BRX8 229 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 DESI2Q9BSY9 194 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 CARD9Q9H257 536 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 RRAGCQ9HB90 399 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 HOXC10Q9NYD6 342 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 DSEQ9UL01 958 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 UBE4BO95155 1302 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MEI4A8MW99 385 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 PDGFRBP09619 1106 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 VCLP18206 1134 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 CRKLP46109 303 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 EPHB4P54760 987 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 POLE2P56282 527 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 LPIN1Q14693 890 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 SNX17Q15036 470 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 MAPK6Q16659 721 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 SMU1Q2TAY7 513 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 TBC1D25Q3MII6 688 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 KRT40Q6A162 431 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 FAM173BQ6P4H8 233 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 POTEEQ6S8J3 1075 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 SRLQ86TD4 932 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 ZBED8Q8IZ13 594 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 IARS2Q9NSE4 1012 aaKnown RBP6.13□□□□□ -1.43
BRCA1-203ENST00000357654 HSPBP1Q9NZL4 362 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 GCNT4Q9P109 453 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 FHOD1Q9Y613 1164 aa6.13□□□□□ -1.43
BRCA1-203ENST00000357654 XDHP47989 1333 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 ADGRF5Q8IZF2 1346 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 RPS6KA5O75582 802 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 GPSM2P81274 684 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 MTMR1Q13613 665 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 MDH1BQ5I0G3 518 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 CENPPQ6IPU0 288 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SWSAP1Q6NVH7 229 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 LRRC8BQ6P9F7 803 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SETD3Q86TU7 594 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 HORMAD1Q86X24 394 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 NRSN1Q8IZ57 195 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 BCAS4Q8TDM0 211 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 UCMAQ8WVF2 138 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 CAPSLQ8WWF8 208 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 S100A13Q99584 98 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 METTL22Q9BUU2 404 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SLC13A1Q9BZW2 595 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 H7C1W4 665 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SCGNO76038 276 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 ZNF202O95125 648 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 PTPN1P18031 435 aaKnown RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 THPOP40225 353 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SGCGQ13326 291 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 KIAA1324Q6UXG2 1013 aaKnown RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 GATAD2AQ86YP4 633 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 FAM133AQ8N9E0 248 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 ATP6V1C2Q8NEY4 427 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 TADA1Q96BN2 335 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 TRIT1Q9H3H1 467 aaKnown RBP6.12□□□□□ -1.43
BRCA1-203ENST00000357654 PSD3Q9NYI0 1048 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 STMN3Q9NZ72 180 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 DNAJC5BQ9UF47 199 aa6.12□□□□□ -1.43
BRCA1-203ENST00000357654 SYNPO2Q9UMS6 1093 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms