RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ANHXE9PGG2 379 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SLC37A4O43826 429 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 GAS2O43903 313 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 RFPL2O75678 378 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 DEXIO95424 95 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 GLUD1P00367 558 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 POMCP01189 267 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SSBP05455 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 URODP06132 367 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SRGAP2CP0DJJ0 459 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SRFP11831 508 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 PSMA5P28066 241 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 AXLP30530 894 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 RFC5P40937 340 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 AK2P54819 239 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 PPP4R3AQ6IN85 833 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 PHLDB3Q6NSJ2 640 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 FERMT3Q86UX7 667 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 SKAP1Q86WV1 359 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 TRIM22Q8IYM9 498 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 RSAD2Q8WXG1 361 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 TMEM143Q96AN5 459 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 CCDC51Q96ER9 411 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 CEP170P1Q96L14 293 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 MYADMQ96S97 322 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 NT5C3AQ9H0P0 336 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.58□□□□□ -0.883e-8■■■■□ 25.6
COL4A3BP-202ENST00000357457 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 DLGAP2Q9P1A6 1054 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 FNIP2Q9P278 1114 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 IPPQ9Y573 584 aa9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 TPRP12270 2363 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-202ENST00000357457 CLUHO75153 1309 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 ARL5CA6NH57 179 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 C2CD2LO14523 706 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 LMNAP02545 664 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 CFHP08603 1231 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 LAMP2P13473 410 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 ITGA4P13612 1032 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 OR1G1P47890 313 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 GLUD2P49448 558 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 PTENP60484 403 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 TOB2Q14106 344 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 EPHA7Q15375 998 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 ELMSAN1Q6PJG2 1045 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 RNF149Q8NC42 400 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 GSTCDQ8NEC7 633 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 SMG7Q92540 1137 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 HAS1Q92839 578 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 GAD1Q99259 594 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 EIF2AQ9BY44 585 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 SLC2A4RGQ9NR83 387 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 GIT1Q9Y2X7 761 aa9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 PRG3Q9Y2Y8 225 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-202ENST00000357457 NOTCH4Q99466 2003 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 TBX3O15119 743 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 TGM5O43548 720 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 TSPAN1O60635 241 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 SLITRK3O94933 977 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 YWHABP31946 246 aaKnown RBP9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 SPIRE1Q08AE8 756 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 EMC2Q15006 297 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 AMHR2Q16671 573 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 INF2Q27J81 1249 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 NOTUMQ6P988 496 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 RUFY3Q7L099 469 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 LXNQ9BS40 222 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 COLEC11Q9BWP8 271 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 CSRNP2Q9H175 543 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 TBC1D17Q9HA65 648 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZDHHC7Q9NXF8 308 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 RGL1Q9NZL6 768 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
COL4A3BP-202ENST00000357457 F5P12259 2224 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZMYM2Q9UBW7 1377 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 MYH15Q9Y2K3 1946 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 SPTBN2O15020 2390 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 F8W810 466 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZBTB39O15060 712 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 EPB41L2O43491 1005 aaKnown RBP9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 NR1I2O75469 434 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 LYPLA2O95372 231 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms