RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DMP1Q13316 513 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 MCM6Q14566 821 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FAM187BQ17R55 369 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FOXD4L6Q3SYB3 417 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SPECC1Q5M775 1068 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FAM109BQ6ICB4 259 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SHC4Q6S5L8 630 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FOXD4L3Q6VB84 417 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 USP49Q70CQ1 688 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 DAW1Q8N136 415 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 DEPTORQ8TB45 409 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 EPS8L1Q8TE68 723 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 LRRC15Q8TF66 581 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 RSPH1Q8WYR4 309 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 BSNDQ8WZ55 320 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ITPKCQ96DU7 683 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PRIMPOLQ96LW4 560 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 OCSTAMPQ9BR26 566 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 TRAIPQ9BWF2 469 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ZFAND3Q9H8U3 227 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 RGS18Q9NS28 235 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PRMT7Q9NVM4 692 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 DACT1Q9NYF0 836 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 CHMP5Q9NZZ3 219 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 USP25Q9UHP3 1055 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 KCNG1Q9UIX4 513 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PCDHA7Q9UN72 937 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 CNTNAP2Q9UHC6 1331 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 A0A087X0B3 334 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FAM237AA0A1B0GTK4 181 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 A0A1W2PQ27 194 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 A0A1W2PQ64 194 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 A0A1W2PQD8 194 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 C9IYK1 514 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SOX1O00570 391 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ENPP3O14638 875 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 N4BP3O15049 544 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 TSPAN1O60635 241 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 TBCAO75347 108 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ERLIN2O94905 339 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FAM13AO94988 1023 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 GJB5O95377 273 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ZIC2O95409 532 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PRKCBP05771 671 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 KRT18P05783 430 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SRGAP2CP0DJJ0 459 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PLS3P13797 630 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ZSCAN20P17040 1043 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FSHRP23945 695 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ABCD1P33897 745 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ZNF131P52739 623 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 EFNA5P52803 228 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 HTRA4P83105 476 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 NFX1Q12986 1120 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 NAALADL2Q58DX5 795 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 MRPL14Q6P1L8 145 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SV2BQ7L1I2 683 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 VASH1Q7L8A9 365 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 KSR1Q8IVT5 923 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 CMTR2Q8IYT2 770 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 MYOCDQ8IZQ8 938 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SLC17A8Q8NDX2 589 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 TIFAQ96CG3 184 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ZNF668Q96K58 619 aaPredicted RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PLIN2Q99541 437 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ADAM2Q99965 735 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ARHGAP9Q9BRR9 750 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PBX4Q9BYU1 374 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 LRRC27Q9C0I9 530 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 TNMDQ9H2S6 317 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 RC3H2Q9HBD1 1191 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ARHGAP28Q9P2N2 729 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 SEL1LQ9UBV2 794 aa4.38□□□□□ -1.71
CNOT4-202ENST00000356162 PIN4Q9Y237 131 aaKnown RBP4.38□□□□□ -1.71
CNOT4-202ENST00000356162 ADGRA3Q8IWK6 1321 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 INO80B-WBP1J3KQ70 363 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 GAP43P17677 238 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 FGFR4P22455 802 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 CMA1P23946 247 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 NCKAP1LP55160 1127 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 FAM189BP81408 668 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 MAPK6Q16659 721 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 ADALQ6DHV7 355 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 CNNM4Q6P4Q7 775 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 SLC24A5Q71RS6 500 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 MAEAQ7L5Y9 396 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 APBB1IPQ7Z5R6 666 aaPredicted RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 ECHDC2Q86YB7 292 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 IQUBQ8NA54 791 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 CNNM3Q8NE01 707 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 MRPS27Q92552 414 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 TOP1MTQ969P6 601 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 HVCN1Q96D96 273 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 ZFP42Q96MM3 310 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 SAMD11Q96NU1 681 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms