RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CCDC172P0C7W6 258 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 ZNF286BP0CG31 522 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 BMS1Q14692 1282 aaKnown RBP27.81■■■□□ 2.04
CLK2-201ENST00000355560 SV2AQ7L0J3 742 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 ZBTB8OSQ8IWT0 167 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 METTL13Q8N6R0 699 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 FBXL13Q8NEE6 735 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 TAS1R2Q8TE23 839 aa27.81■■■□□ 2.04
CLK2-201ENST00000355560 A0A0B4J269 797 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 FOXN3O00409 490 aaPredicted RBP27.8■■■□□ 2.04
CLK2-201ENST00000355560 SMPD1P17405 629 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 IGBP1P78318 339 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 ACVR2BQ13705 512 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 C10orf76Q5T2E6 689 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 EFCAB12Q6NXP0 572 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 ALKBH5Q6P6C2 394 aaKnown RBP27.8■■■□□ 2.04
CLK2-201ENST00000355560 TRAPPC11Q7Z392 1133 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 UBXN4Q92575 508 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 SLC5A4Q9NY91 659 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 MYH10P35580 1976 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 MSCO60682 206 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 TFRCP02786 760 aaKnown RBP27.8■■■□□ 2.04
CLK2-201ENST00000355560 GJB1P08034 283 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 CLCN3P51790 818 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 PSMD6Q15008 389 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 NAB2Q15742 525 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 DUSP28Q4G0W2 176 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 RGMBQ6NW40 437 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 CRELD2Q6UXH1 353 aaPredicted RBP27.8■■■□□ 2.04
CLK2-201ENST00000355560 ZPBP2Q6X784 338 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 NOX5Q96PH1 765 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 FNBP1Q96RU3 617 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 MRPL4Q9BYD3 311 aaKnown RBP27.8■■■□□ 2.04
CLK2-201ENST00000355560 DOCK3Q8IZD9 2030 aa27.8■■■□□ 2.04
CLK2-201ENST00000355560 EVPLQ92817 2033 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 TTLL13PA6NNM8 815 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 BUB1O43683 1085 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 C22orf31O95567 290 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 LDHAP00338 332 aaKnown RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 INSRRP14616 1297 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 KLRC1P26715 233 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 GPC3P51654 580 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 PAPD7Q5XG87 772 aaKnown RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 PPM1KQ8N3J5 372 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 RNF10Q8N5U6 811 aaKnown RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 VTI1AQ96AJ9 217 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 NLRP4Q96MN2 994 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 ZCCHC17Q9NP64 241 aaKnown RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 RAB20Q9NX57 234 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 DDX3XO00571 662 aaKnown RBP eCLIP27.79■■■□□ 2.042e-8■□□□□ 9
CLK2-201ENST00000355560 NAP1L1P55209 391 aaKnown RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 MAPK6Q16659 721 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 ZNF484Q5JVG2 852 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 ZBTB41Q5SVQ8 909 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 KAT5Q92993 513 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 C2orf40Q9H1Z8 148 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 RBAKQ9NYW8 714 aaPredicted RBP27.79■■■□□ 2.04
CLK2-201ENST00000355560 NENFQ9UMX5 172 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 SAR1BQ9Y6B6 198 aa27.79■■■□□ 2.04
CLK2-201ENST00000355560 PRKCBP05771 671 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 HARSP12081 509 aaKnown RBP27.78■■■□□ 2.04
CLK2-201ENST00000355560 WNT7BP56706 349 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 HSP90AA2PQ14568 343 aaPredicted RBP27.78■■■□□ 2.04
CLK2-201ENST00000355560 WHAMMP3Q1A5X7 153 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 SRGAP1Q7Z6B7 1085 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 CEP112Q8N8E3 955 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 ZNF668Q96K58 619 aaPredicted RBP27.78■■■□□ 2.04
CLK2-201ENST00000355560 FAM84AQ96KN4 292 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 C16orf70Q9BSU1 422 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 PUF60Q9UHX1 559 aaKnown RBP27.78■■■□□ 2.04
CLK2-201ENST00000355560 JRKLQ9Y4A0 524 aa27.78■■■□□ 2.04
CLK2-201ENST00000355560 CLDN3O15551 220 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 PPFIA4O75335 1185 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 CLDN10P78369 228 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 TFDP1Q14186 410 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 KIF22Q14807 665 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 MORN1Q5T089 497 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 LMBRD2Q68DH5 695 aaPredicted RBP27.77■■■□□ 2.04
CLK2-201ENST00000355560 OLIG1Q8TAK6 271 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 LNX1Q8TBB1 728 aaPredicted RBP27.77■■■□□ 2.04
CLK2-201ENST00000355560 PDE11AQ9HCR9 933 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 TNNI1P19237 187 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 GLYCTKQ8IVS8 523 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
CLK2-201ENST00000355560 NT5C1BQ96P26 610 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 SYT11Q9BT88 431 aa27.77■■■□□ 2.04
CLK2-201ENST00000355560 TOM1L1O75674 476 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 MAP2K5Q13163 448 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 OR6J1Q8NGC5 347 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 ZNF516Q92618 1163 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 ADCY6O43306 1168 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 MMP3P08254 477 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 CHMP4BP1P59074 171 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 IQSEC1Q6DN90 963 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 C15orf39Q6ZRI6 1047 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 DNAAF5Q86Y56 855 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 SLC30A5Q8TAD4 765 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 U2AF1L4Q8WU68 220 aaKnown RBP27.76■■■□□ 2.03
CLK2-201ENST00000355560 KREMEN1Q96MU8 473 aa27.76■■■□□ 2.03
CLK2-201ENST00000355560 TCHPQ9BT92 498 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms