RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 AP1B1Q10567 949 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 DNAJC3Q13217 504 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ARL13BQ3SXY8 428 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 RFWD2Q8NHY2 731 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 TMEM260Q9NX78 707 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 HERC5Q9UII4 1024 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 V9GYQ6 96 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 A0A0U1RQJ8 604 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 FAM187AA6NFU0 413 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 UFL1O94874 794 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 HSPA6P17066 643 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 NANOGNBQ7Z5D8 188 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 PRPF39Q86UA1 669 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 PIH1D3Q9NQM4 214 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 AKAP7Q9P0M2 348 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 AIM2O14862 343 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 AKAP10O43572 662 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 VCPP55072 806 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 NSUN2Q08J23 767 aaKnown RBP eCLIP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 CDC37Q16543 378 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 OR6B2Q6IFH4 312 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ATP10BO94823 1461 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 HLA-DPA1P20036 260 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 NT5C2P49902 561 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ELF3P78545 371 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 BYSLQ13895 437 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 DDHD1Q8NEL9 900 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 SNX19Q92543 992 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 MRGBPQ9NV56 204 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 C2CD2Q9Y426 696 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 EDC4Q6P2E9 1401 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ARL4CP56559 192 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ZNF394Q53GI3 561 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 FAM83BQ5T0W9 1011 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ZFYVE19Q96K21 471 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 CCDC22O60826 627 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 MRPL28Q13084 256 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ZC3H12BQ5HYM0 836 aaKnown RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 DNAJC24Q6P3W2 148 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 DNAAF5Q86Y56 855 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
VANGL1-202ENST00000355485 URGCPQ8TCY9 931 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 BTBD6Q96KE9 485 aa8.32□□□□□ -1.08
VANGL1-202ENST00000355485 LOC100653049A0A140TA62 436 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KRT34O76011 436 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 FTLP02792 175 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KYNUQ16719 465 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 TRIM16LQ309B1 348 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 CCNYL1Q8N7R7 359 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 NSL1Q96IY1 281 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 DAPK2Q9UIK4 370 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 GYPCP04921 128 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 PLEKP08567 350 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 SRGAP2CP0DJJ0 459 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 ADD2P35612 726 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 GPC5P78333 572 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KCNA1Q09470 495 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 TTC23Q5W5X9 447 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 SLFN12Q8IYM2 578 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 HNRNPLLQ8WVV9 542 aaKnown RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 OMA1Q96E52 524 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KIFC3Q9BVG8 833 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 IL25Q9H293 177 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 PDP2Q9P2J9 529 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 PHTF1Q9UMS5 762 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 MROH7-TTC4A0A0A0MT08 1334 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 AGRPO00253 132 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 CCNHP51946 323 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 PRKG1Q13976 671 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KCTD2Q14681 263 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 IFNLR1Q8IU57 520 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 GLYCTKQ8IVS8 523 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 LZTS2Q9BRK4 669 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KDM5AP29375 1690 aaKnown RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 AP3B1O00203 1094 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 ABCD1P33897 745 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KCNH2Q12809 1159 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 GFM2Q969S9 779 aaKnown RBP8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KDM5CP41229 1560 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 DLGAP5Q15398 846 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 EXD1Q8NHP7 514 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KCNB2Q92953 911 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 BRIP1Q9BX63 1249 aa8.31□□□□□ -1.08
VANGL1-202ENST00000355485 KLC2Q9H0B6 622 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms