RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 EXOC4Q96A65 974 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TMEM106CQ9BVX2 250 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 SPON1Q9HCB6 807 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 DAGLAQ9Y4D2 1042 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 SPAG7O75391 227 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TADA3O75528 432 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 GGPS1O95749 300 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 CTSHP09668 335 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 ATP2C1P98194 919 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 PID1Q7Z2X4 250 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TBC1D1Q86TI0 1168 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 NSUN4Q96CB9 384 aaKnown RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.1■□□□□ 0.656e-15■■□□□ 13.9
COL18A1-202ENST00000355480 TEX13BQ9BXU2 312 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TMEM60Q9H2L4 133 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TRPC7Q9HCX4 862 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 CRB1P82279 1406 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 EEF1DP29692 281 aaKnown RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TAP1Q03518 808 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 OSBPL9Q96SU4 736 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 DDX47Q9H0S4 455 aaKnown RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 KCNJ6P48051 423 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 STRIP1Q5VSL9 837 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 SMIM5Q71RC9 77 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 DDX50Q9BQ39 737 aaKnown RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TEKT2Q9UIF3 430 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 NPHP3-ACAD11A0A0J9YXS1 232 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 APOL1O14791 398 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 DYNC1LI2O43237 492 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 BAATQ14032 418 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 ZC3H18Q86VM9 953 aaKnown RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SRBD1Q8N5C6 995 aaKnown RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SLC7A5P2Q9GIP4 190 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SMYD3Q9H7B4 428 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 PLEKHA5Q9HAU0 1116 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SUFUQ9UMX1 484 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 GUCY2CP25092 1073 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 HSD17B4P51659 736 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SLC26A7Q8TE54 656 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SCHIP1Q9P0W5 487 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 AGAP1Q9UPQ3 857 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 PIK3R2O00459 728 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 CYBBP04839 570 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 RBBP7Q16576 425 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 RBM46Q8TBY0 533 aaKnown RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SH3TC2Q8TF17 1288 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 COG4Q9H9E3 785 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 CASS4Q9NQ75 786 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 CAPN11Q9UMQ6 739 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 KBTBD13C9JR72 458 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SETSIPP0DME0 302 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 FRMD5Q7Z6J6 570 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 TRIM45Q9H8W5 580 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 TTC26A0AVF1 554 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 CYP26A1O43174 497 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 DIAPH2O60879 1101 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 C6orf222P0C671 652 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-202ENST00000355480 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 EPAS1Q99814 870 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 SLC13A1Q9BZW2 595 aa19.09■□□□□ 0.65
COL18A1-202ENST00000355480 MYO1DO94832 1006 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 RARBP10826 455 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 APPL2Q8NEU8 664 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 C1orf54Q8WWF1 131 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 SNF8Q96H20 258 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 TEX12Q9BXU0 123 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 MLXIPLQ9NP71 852 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 ZC3H4Q9UPT8 1303 aaKnown RBP19.08■□□□□ 0.65
COL18A1-202ENST00000355480 ATP9BO43861 1147 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 SULT1E1P49888 294 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 PDCLQ13371 301 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 FASTKD1Q53R41 847 aaKnown RBP19.08■□□□□ 0.65
COL18A1-202ENST00000355480 ANKRD40Q6AI12 368 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 TRIML2Q8N7C3 387 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 CRAMP1Q96RY5 1269 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 MTMR4Q9NYA4 1195 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 ZFP69BQ9UJL9 534 aa19.08■□□□□ 0.65
COL18A1-202ENST00000355480 TADA2AO75478 443 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 XKR3Q5GH77 459 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 CCDC137Q6PK04 289 aaKnown RBP19.08■□□□□ 0.64
COL18A1-202ENST00000355480 KDELC2Q7Z4H8 507 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 KIF28PB7ZC32 967 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF157P51786 506 aaPredicted RBP19.08■□□□□ 0.64
COL18A1-202ENST00000355480 TPI1P60174 286 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 LPAR1Q92633 364 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 KDM6BO15054 1643 aa19.08■□□□□ 0.64
COL18A1-202ENST00000355480 CFAP69A5D8W1 941 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 NBPF26B4DH59 902 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 TEX33O43247 280 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 MAGOHP61326 146 aaKnown RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 NBPF10Q6P3W6 841 aaKnown RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 DDX53Q86TM3 631 aaKnown RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 GSPT2Q8IYD1 628 aaKnown RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 NBPF15Q8N660 670 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 RFFLQ8WZ73 363 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 SH2D3AQ9BRG2 576 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 TRPV6Q9H1D0 765 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 SNX9Q9Y5X1 595 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms