RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 GUF1Q8N442 669 aaKnown RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 MYCBPAPQ8TBZ2 947 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 HPS3Q969F9 1004 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 PDLIM7Q9NR12 457 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 STK38LQ9Y2H1 464 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 IDEP14735 1019 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 GAP43P17677 238 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 ABCD1P33897 745 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 RGS2P41220 211 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 EPM2AIP1Q7L775 607 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 DRAXINQ8NBI3 349 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 OR8K1Q8NGG5 319 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 NELFBQ8WX92 580 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 APBA2Q99767 749 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 NIFKQ9BYG3 293 aaKnown RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 ZNF302Q9NR11 478 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 CTNND2Q9UQB3 1225 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 EMSYQ7Z589 1322 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 SYNRGQ9UMZ2 1314 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 ZSWIM8A7E2V4 1837 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 ZSCAN5CA6NGD5 496 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 LACTBP83111 547 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-203ENST00000354674 ACVR2BQ13705 512 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 LAMC2Q13753 1193 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 HSDL1Q3SXM5 330 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 XKR3Q5GH77 459 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 CDKAL1Q5VV42 579 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 IQSEC1Q6DN90 963 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 CENPPQ6IPU0 288 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 DAW1Q8N136 415 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 FIZ1Q96SL8 496 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 PCDHGC5Q9Y5F6 944 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 DOCK3Q8IZD9 2030 aa10.91□□□□□ -0.66
SYNE1-203ENST00000354674 MACROD2A1Z1Q3 448 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 A8MUI8 341 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 SORBS3O60504 671 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 KRT18P05783 430 aaKnown RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 RSPH10BP0C881 870 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 CCNE1P24864 410 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TCF7P36402 384 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 PRKCEQ02156 737 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 GRM1Q13255 1194 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 ODF2Q5BJF6 829 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 HERC4Q5GLZ8 1057 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TTI2Q6NXR4 508 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 CCNI2Q6ZMN8 369 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 PLPPR4Q7Z2D5 763 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 COPS5Q92905 334 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 EEF2KMTQ96G04 330 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 LRRC1Q9BTT6 524 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 FGFBP2Q9BYJ0 223 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 PSMA7O14818 248 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 NKRFO15226 690 aaKnown RBP eCLIP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 ZNF865P0CJ78 1059 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 NEFHP12036 1026 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 SCTRP47872 440 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 PMS1P54277 932 aaKnown RBP10.9□□□□□ -0.66
SYNE1-203ENST00000354674 BMT2Q1RMZ1 405 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 DUSP28Q4G0W2 176 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 FAM47EQ6ZV65 393 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 SPATA21Q7Z572 469 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 GLIS3Q8NEA6 775 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 OR2W6PQ8NHA6 318 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 ZIM3Q96PE6 472 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.66
SYNE1-203ENST00000354674 TMEM150BA6NC51 233 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 RNF225M0QZC1 329 aaPredicted RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 HSF2BPO75031 334 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 COQ9O75208 318 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 GH1P01241 217 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 ADCYAP1R1P41586 468 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 VEGFBP49765 207 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 TUBP50607 506 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 FCGRTP55899 365 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 ZBED6P86452 979 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SP4Q02446 784 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms