RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ZDHHC24Q6UX98 284 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 MICALCLQ6ZW33 695 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 NEK9Q8TD19 979 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 TAS1R2Q8TE23 839 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 TATDN2Q93075 761 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 NOCTQ9UK39 431 aaKnown RBP21.03■□□□□ 0.96
COL13A1-201ENST00000354547 DENND3A2RUS2 1198 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 RFX1P22670 979 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 CNGA1P29973 690 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 RMDN3Q96TC7 470 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 PDGFDQ9GZP0 370 aaPredicted RBP21.03■□□□□ 0.96
COL13A1-201ENST00000354547 CCNE2O96020 404 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 FMO1Q01740 532 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 AGBL2Q5U5Z8 902 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 AZI2Q9H6S1 392 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 SSTR3P32745 418 aaPredicted RBP21.02■□□□□ 0.96
COL13A1-201ENST00000354547 GTF2BQ00403 316 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 CPLX4Q7Z7G2 160 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 C1orf54Q8WWF1 131 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 EPB41L4BQ9H329 900 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 DDX20Q9UHI6 824 aaKnown RBP21.02■□□□□ 0.96
COL13A1-201ENST00000354547 UBIAD1Q9Y5Z9 338 aa21.02■□□□□ 0.96
COL13A1-201ENST00000354547 MIF4GDA9UHW6 222 aaKnown RBP21.02■□□□□ 0.95
COL13A1-201ENST00000354547 TRAPPC3O43617 180 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 PTGIRP43119 386 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 MFAP3P55082 362 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 IFI35P80217 286 aaPredicted RBP21.02■□□□□ 0.95
COL13A1-201ENST00000354547 DHX34Q14147 1143 aaKnown RBP21.02■□□□□ 0.95
COL13A1-201ENST00000354547 DAB2IPQ5VWQ8 1189 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 LLGL2Q6P1M3 1020 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 FAM71AQ8IYT1 594 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 POMGNT1Q8WZA1 660 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 DNAJC17Q9NVM6 304 aaKnown RBP21.02■□□□□ 0.95
COL13A1-201ENST00000354547 TELO2Q9Y4R8 837 aa21.02■□□□□ 0.95
COL13A1-201ENST00000354547 CLDN3O15551 220 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 CYP11B1P15538 503 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 NPTX2P47972 431 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 PEX5P50542 639 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 CCDC38Q502W7 563 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 C11orf63Q6NUN7 778 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 TRIM7Q9C029 511 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 GRHL1Q9NZI5 618 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 DBR1Q9UK59 544 aaKnown RBP21.01■□□□□ 0.95
COL13A1-201ENST00000354547 TBX20Q9UMR3 447 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 RBBP6Q7Z6E9 1792 aaKnown RBP21.01■□□□□ 0.95
COL13A1-201ENST00000354547 FAM187AA6NFU0 413 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 MYBPC2Q14324 1141 aa21.01■□□□□ 0.95
COL13A1-201ENST00000354547 TRIP13Q15645 432 aaPredicted RBP21.01■□□□□ 0.95
COL13A1-201ENST00000354547 PABPC3Q9H361 631 aaKnown RBP21.01■□□□□ 0.95
COL13A1-201ENST00000354547 RARAP10276 462 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 PDE6CP51160 858 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 PGM5Q15124 567 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 PCNX4Q63HM2 1172 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 KRT39Q6A163 491 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 MCF2L2Q86YR7 1114 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 EPS8L3Q8TE67 593 aaKnown RBP21■□□□□ 0.95
COL13A1-201ENST00000354547 BSNDQ8WZ55 320 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 CABS1Q96KC9 395 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 GMLQ99445 158 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 KMT5AQ9NQR1 393 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 CTNND1O60716 968 aaKnown RBP21■□□□□ 0.95
COL13A1-201ENST00000354547 CHRNA3P32297 505 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 SMTNP53814 917 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 PPP1R7Q15435 360 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 ARHGEF16Q5VV41 709 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 PARD3BQ8TEW8 1205 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 BICD1Q96G01 975 aa21■□□□□ 0.95
COL13A1-201ENST00000354547 CPP00450 1065 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 DMP1Q13316 513 aaPredicted RBP20.99■□□□□ 0.95
COL13A1-201ENST00000354547 ALCAMQ13740 583 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 PPP2R5EQ16537 467 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 ANO5Q75V66 913 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 WNK4Q96J92 1243 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 CEP170P1Q96L14 293 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 TXLNGYQ9BZA5 131 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 PFASO15067 1338 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 WNT10BO00744 389 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 PSMC5P62195 406 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 SLC13A5Q86YT5 568 aaPredicted RBP20.99■□□□□ 0.95
COL13A1-201ENST00000354547 TMEM161BQ8NDZ6 487 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 ATG4AQ8WYN0 398 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 NT5C1BQ96P26 610 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 FAM118BQ9BPY3 351 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 TBC1D22BQ9NU19 505 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 RPTORQ8N122 1335 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 GOLGA6L7A0A1B0GV03 622 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 P4HA2O15460 535 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 RGS16O15492 202 aaPredicted RBP20.99■□□□□ 0.95
COL13A1-201ENST00000354547 VPS41P49754 854 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 CCDC121Q6ZUS5 278 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 HOOK3Q86VS8 718 aa20.99■□□□□ 0.95
COL13A1-201ENST00000354547 HNRNPDLO14979 420 aaKnown RBP20.98■□□□□ 0.95
COL13A1-201ENST00000354547 PLA2G6O60733 806 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 CHN1P15882 459 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 HNRNPH1P31943 449 aaKnown RBP20.98■□□□□ 0.95
COL13A1-201ENST00000354547 COILP38432 576 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-201ENST00000354547 IFNAR2P48551 515 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 CPA5Q8WXQ8 436 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 SHC3Q92529 594 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 SEC16BQ96JE7 1060 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms