RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MYH3P11055 1940 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 ZNF862O60290 1169 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 EDF1O60869 148 aaKnown RBP14.13□□□□□ -0.15
IFT88-202ENST00000351808 PGM3O95394 542 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 BAG2O95816 211 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 TTLL1O95922 423 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 GNAT2P19087 354 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 SLC9A1P19634 815 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 RGS2P41220 211 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 KCNJ1P48048 391 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 FKBP3Q00688 224 aaKnown RBP14.13□□□□□ -0.15
IFT88-202ENST00000351808 CDC16Q13042 620 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
IFT88-202ENST00000351808 ZNF568Q3ZCX4 644 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 TMEM110Q86TL2 294 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 HSPBAP1Q96EW2 488 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 FAM81BQ96LP2 452 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 TTC1Q99614 292 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 TAOK3Q9H2K8 898 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 ANGPTL2Q9UKU9 493 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 SMIM31A0A1B0GVY4 71 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 A0A1W2PRG0 241 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 TMEM247A6NEH6 219 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 CCDC160A6NGH7 325 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 MAGEB2O15479 319 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 ANPEPP15144 967 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 CHRNA3P32297 505 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 MAP3K10Q02779 954 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 GSTM4Q03013 218 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RINLQ6ZS11 566 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 SV2BQ7L1I2 683 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 MIGA1Q8NAN2 632 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 DGCR14Q96DF8 476 aaKnown RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 ABHD8Q96I13 439 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 SLC52A2Q9HAB3 445 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 NPHS2Q9NP85 383 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 DCTN4Q9UJW0 460 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 A0A0A6YYK5 440 aaPredicted RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 FAM47DPA6NHR8 397 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 USP1O94782 785 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 ABCB4P21439 1286 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 CHKAP35790 457 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 TECP42680 631 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 CCDC105Q8IYK2 499 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 GAB3Q8WWW8 586 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 R3HDM2Q9Y2K5 976 aaKnown RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 TMEM110-MUSTN1A8MSY1 372 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RASA4BC9J798 803 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 VILLO15195 856 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RASA4O43374 803 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 VCAM1P19320 739 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 NPEPPSP55786 919 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 PLEKHG4Q58EX7 1191 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 TMEM63BQ5T3F8 832 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 LRRC8BQ6P9F7 803 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 B3GNT6Q6ZMB0 384 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RBM44Q6ZP01 1051 aaKnown RBP14.12□□□□□ -0.15
IFT88-202ENST00000351808 PHLDB2Q86SQ0 1253 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 PRUNE1Q86TP1 453 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 C7orf43Q8WVR3 580 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 ARFGEF2Q9Y6D5 1785 aa14.12□□□□□ -0.15
IFT88-202ENST00000351808 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 PLSCR1O15162 318 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 TRIM59Q8IWR1 403 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.155e-12■■■■■ 96.1
IFT88-202ENST00000351808 TAS2R1Q9NYW7 299 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 PCYOX1Q9UHG3 505 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 GRID1Q9ULK0 1009 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 DIS3Q9Y2L1 958 aaKnown RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 IGSF9BQ9UPX0 1349 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 RICTORQ6R327 1708 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 HNRNPCL1O60812 293 aaKnown RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 ZWINTO95229 277 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 BCRP11274 1271 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 UCHL3P15374 230 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 CALML3P27482 149 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 CRABP2P29373 138 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 CALCOCO2Q13137 446 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 C3orf67Q6ZVT6 689 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 ACAD11Q709F0 780 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 OTOAQ7RTW8 1153 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 IRGQQ8WZA9 623 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 EFR3BQ9Y2G0 817 aa14.11□□□□□ -0.15
IFT88-202ENST00000351808 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
IFT88-202ENST00000351808 ADGRA3Q8IWK6 1321 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 POTEFA5A3E0 1075 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms