RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 FRMD5Q7Z6J6 570 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 GPD1LQ8N335 351 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 TCHPQ9BT92 498 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 CDT1Q9H211 546 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 ERVK-5Q9HDB9 667 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 ST3GAL5Q9UNP4 418 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 N4BP3O15049 544 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 EXTL3O43909 919 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 GHRP10912 638 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 EPB41P11171 864 aaKnown RBP29.53■■■□□ 2.32
SSBP4-202ENST00000348495 KRT31Q15323 416 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 TMEM132AQ24JP5 1023 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 ZNF568Q3ZCX4 644 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 NOTUMQ6P988 496 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 ZBTB33Q86T24 672 aa29.53■■■□□ 2.32
SSBP4-202ENST00000348495 MCF2P10911 925 aa29.52■■■□□ 2.32
SSBP4-202ENST00000348495 MCCD1P59942 119 aaPredicted RBP29.52■■■□□ 2.32
SSBP4-202ENST00000348495 FANCCQ00597 558 aa29.52■■■□□ 2.32
SSBP4-202ENST00000348495 FAM186BQ8IYM0 893 aa29.52■■■□□ 2.32
SSBP4-202ENST00000348495 KIAA1586Q9HCI6 787 aa29.52■■■□□ 2.32
SSBP4-202ENST00000348495 GOLGA8IPA6NC78 632 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 GOLGA8JA6NMD2 632 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 GPR182O15218 404 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 SNRNP35Q16560 246 aaKnown RBP29.51■■■□□ 2.32
SSBP4-202ENST00000348495 CRELD2Q6UXH1 353 aaPredicted RBP29.51■■■□□ 2.32
SSBP4-202ENST00000348495 CBWD2Q8IUF1 395 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 HIPK3Q9H422 1215 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 METTL14Q9HCE5 456 aaKnown RBP29.51■■■□□ 2.32
SSBP4-202ENST00000348495 PADI3Q9ULW8 664 aa29.51■■■□□ 2.32
SSBP4-202ENST00000348495 PIN4Q9Y237 131 aaKnown RBP29.51■■■□□ 2.32
SSBP4-202ENST00000348495 UMODL1Q5DID0 1318 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 OGTO15294 1046 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 LDHAP00338 332 aaKnown RBP29.51■■■□□ 2.31
SSBP4-202ENST00000348495 CD52P31358 61 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 MATR3P43243 847 aaKnown RBP eCLIP29.51■■■□□ 2.31
SSBP4-202ENST00000348495 CCDC40Q4G0X9 1142 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 ZBTB41Q5SVQ8 909 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 COL13A1Q5TAT6 717 aaPredicted RBP29.51■■■□□ 2.31
SSBP4-202ENST00000348495 SLC27A1Q6PCB7 646 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 TRIM59Q8IWR1 403 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 CCDC51Q96ER9 411 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 FAM213AQ9BRX8 229 aa29.51■■■□□ 2.31
SSBP4-202ENST00000348495 ARMCX3Q9UH62 379 aaPredicted RBP29.51■■■□□ 2.31
SSBP4-202ENST00000348495 ADRB2P07550 413 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 CLTBP09497 229 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 GPNMBQ14956 572 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 RDH13Q8NBN7 331 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 ANKRD20A12PQ8NF67 263 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 CHST12Q9NRB3 414 aa29.5■■■□□ 2.31
SSBP4-202ENST00000348495 TANC1Q9C0D5 1861 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 HARSP12081 509 aaKnown RBP29.49■■■□□ 2.31
SSBP4-202ENST00000348495 ACOT2P49753 483 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 PAK2Q13177 524 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 CREBRFQ8IUR6 639 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 MFSD14AQ96MC6 490 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 TUBGCP2Q9BSJ2 902 aa29.49■■■□□ 2.31
SSBP4-202ENST00000348495 MTIF2P46199 727 aaKnown RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 NFX1Q12986 1120 aaKnown RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 HSP90AA2PQ14568 343 aaPredicted RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 DCAF4L1Q3SXM0 396 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 UBXN11Q5T124 520 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 NAP1L5Q96NT1 182 aaPredicted RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 ADPGKQ9BRR6 497 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 TAB2Q9NYJ8 693 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 CPSF3Q9UKF6 684 aaKnown RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 SERPINC1P01008 464 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 COPB1P53618 953 aaKnown RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 INTS8Q75QN2 995 aaKnown RBP29.48■■■□□ 2.31
SSBP4-202ENST00000348495 WNT8AQ9H1J5 351 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 TMX1Q9H3N1 280 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 TMEM39AQ9NV64 488 aa29.48■■■□□ 2.31
SSBP4-202ENST00000348495 ZNF233A6NK53 670 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 NBNO60934 754 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 MAN2A1Q16706 1144 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 MIIPQ5JXC2 388 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 CEP120Q8N960 986 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 EIF2AQ9BY44 585 aaKnown RBP29.47■■■□□ 2.31
SSBP4-202ENST00000348495 IFNKQ9P0W0 207 aa29.47■■■□□ 2.31
SSBP4-202ENST00000348495 A0A1B0GTH6 734 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 PLCB2Q00722 1185 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 CYP24A1Q07973 514 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 DSC3Q14574 896 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 SEZ6Q53EL9 994 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 APBB1IPQ7Z5R6 666 aaPredicted RBP29.46■■■□□ 2.31
SSBP4-202ENST00000348495 THNSL1Q8IYQ7 743 aa29.46■■■□□ 2.31
SSBP4-202ENST00000348495 NPTXRO95502 500 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 TNFSF9P41273 254 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 ENPEPQ07075 957 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 BFSP1Q12934 665 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 PLEKHO2Q8TD55 490 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 SLC35C1Q96A29 364 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 INTS13Q9NVM9 706 aa29.45■■■□□ 2.31
SSBP4-202ENST00000348495 PARNO95453 639 aaKnown RBP29.45■■■□□ 2.3
SSBP4-202ENST00000348495 UBASH3AP57075 661 aa29.45■■■□□ 2.3
SSBP4-202ENST00000348495 KYAT1Q16773 422 aa29.45■■■□□ 2.3
SSBP4-202ENST00000348495 ABHD8Q96I13 439 aa29.45■■■□□ 2.3
SSBP4-202ENST00000348495 IFIH1Q9BYX4 1025 aaKnown RBP29.45■■■□□ 2.3
SSBP4-202ENST00000348495 PPP1R12CQ9BZL4 782 aa29.45■■■□□ 2.3
SSBP4-202ENST00000348495 XPO4Q9C0E2 1151 aaKnown RBP29.45■■■□□ 2.3
SSBP4-202ENST00000348495 VPS16Q9H269 839 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms