RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FAM207AQ9NSI2 230 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 SPTLC3Q9NUV7 552 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 FBXL5Q9UKA1 691 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 PLAGL2Q9UPG8 496 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 AKT3Q9Y243 479 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 SIP14410 1827 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CLDN3O15551 220 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 TREHO43280 583 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 NRDCO43847 1150 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ZEB2O60315 1214 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 CYP2C9P11712 490 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ACTN1P12814 892 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 APBA1Q02410 837 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 SRGAP1Q7Z6B7 1085 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 CHP1Q99653 195 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 LSM14BQ9BX40 385 aaKnown RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 PRMT7Q9NVM4 692 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 CEP72Q9P209 647 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 TNFSF13BQ9Y275 285 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 COQ4Q9Y3A0 265 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 KAT6AQ92794 2004 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 C17orf102A2RUQ5 167 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 INO80B-WBP1J3KQ70 363 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 CSDE1O75534 798 aaKnown RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 GNAT1P11488 350 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 GTF2H1P32780 548 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 CDK17Q00537 523 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 PSMD6Q15008 389 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 KCNA10Q16322 511 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 NBPF20Q3BBV1 942 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ATF7IP2Q5U623 682 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 PDXDC1Q6P996 788 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 RAD9BQ6WBX8 426 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 RUFY4Q6ZNE9 571 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 NME8Q8N427 588 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 POP1Q99575 1024 aaKnown RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 INO80BQ9C086 356 aaPredicted RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 CDHR5Q9HBB8 845 aa11.94□□□□□ -0.5
ECM1-201ENST00000346569 DDX20Q9UHI6 824 aaKnown RBP11.94□□□□□ -0.5
ECM1-201ENST00000346569 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 TNRC18O15417 2968 aaPredicted RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 OGTO15294 1046 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 B4GALT5O43286 388 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 N4BP1O75113 896 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 ASGR1P07306 291 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 UCHL3P15374 230 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 CLCN1P35523 988 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 GCLMP48507 274 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 ACOT2P49753 483 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 WNT7BP56706 349 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 POLR2FP61218 127 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 PRPF4BQ13523 1007 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 EPC2Q52LR7 807 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 ZBTB41Q5SVQ8 909 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 EEF1DP3Q658K8 133 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 LHX8Q68G74 356 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 CYP26C1Q6V0L0 522 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 C15orf39Q6ZRI6 1047 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 SESTD1Q86VW0 696 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 ZNF710Q8N1W2 664 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 DNAJB3Q8WWF6 145 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 SYN2Q92777 582 aaPredicted RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 NUCKS1Q9H1E3 243 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 GTF2IRD1Q9UHL9 959 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 CPSF3Q9UKF6 684 aaKnown RBP11.93□□□□□ -0.5
ECM1-201ENST00000346569 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
ECM1-201ENST00000346569 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 SOWAHDA6NJG2 315 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
ECM1-201ENST00000346569 GRK4P32298 578 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
ECM1-201ENST00000346569 MTF1Q14872 753 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 KIZQ2M2Z5 673 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 KRT39Q6A163 491 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms