RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 H3BRB1 525 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 CLDN3O15551 220 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 ABL1P00519 1130 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 PRKCBP05771 671 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 MMP3P08254 477 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 RGS2P41220 211 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 BMS1Q14692 1282 aaKnown RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 HHIPL1Q96JK4 782 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 C16orf70Q9BSU1 422 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 TUT1Q9H6E5 874 aaKnown RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 ADAMTS1Q9UHI8 967 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 AJAP1Q9UKB5 411 aaPredicted RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 RCCD1A6NED2 376 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 MSCO60682 206 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 ZC3H11AO75152 810 aaKnown RBP eCLIP27.34■■□□□ 1.97
TRADD-201ENST00000345057 TACC1O75410 805 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 MAP2K1Q02750 393 aaPredicted RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 OLFML2BQ68BL8 750 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 RNF10Q8N5U6 811 aaKnown RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 ALS2CR12Q96Q35 445 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 UBE2TQ9NPD8 197 aaPredicted RBP27.34■■□□□ 1.97
TRADD-201ENST00000345057 ANKFY1Q9P2R3 1169 aa27.34■■□□□ 1.97
TRADD-201ENST00000345057 EVI5O60447 810 aa27.33■■□□□ 1.97
TRADD-201ENST00000345057 DLATP10515 647 aaKnown RBP27.33■■□□□ 1.97
TRADD-201ENST00000345057 ZNF571Q7Z3V5 609 aaPredicted RBP27.33■■□□□ 1.97
TRADD-201ENST00000345057 MNS1Q8NEH6 495 aa27.33■■□□□ 1.97
TRADD-201ENST00000345057 TRAPPC12Q8WVT3 735 aa27.33■■□□□ 1.97
TRADD-201ENST00000345057 A0A087X0T9 212 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 ANO9A1A5B4 782 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 FAM228BP0C875 321 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 ENOX2Q16206 610 aaKnown RBP27.32■■□□□ 1.96
TRADD-201ENST00000345057 USP6NLQ92738 828 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 RAB20Q9NX57 234 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 RBAKQ9NYW8 714 aaPredicted RBP27.32■■□□□ 1.96
TRADD-201ENST00000345057 FAM155AB1AL88 458 aaPredicted RBP27.32■■□□□ 1.96
TRADD-201ENST00000345057 PHKA2P46019 1235 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 MFAP3P55082 362 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 NLRP11P59045 1033 aaKnown RBP27.32■■□□□ 1.96
TRADD-201ENST00000345057 GPIHBP1Q8IV16 184 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 NT5C1BQ96P26 610 aa27.32■■□□□ 1.96
TRADD-201ENST00000345057 ACKR2O00590 384 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 ZNF286BP0CG31 522 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 KLRC1P26715 233 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 PTENP60484 403 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 IGBP1P78318 339 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 NAB2Q15742 525 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 SV2AQ7L0J3 742 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 SMC1BQ8NDV3 1235 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 NLRP4Q96MN2 994 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 APBA2Q99767 749 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 ACO2Q99798 780 aaKnown RBP27.31■■□□□ 1.96
TRADD-201ENST00000345057 TCHPQ9BT92 498 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 FZD8Q9H461 694 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 CDC23Q9UJX2 597 aa27.31■■□□□ 1.96
TRADD-201ENST00000345057 MACROD2A1Z1Q3 448 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 TM4SF4P48230 202 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 CLCN3P51790 818 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 AP3M2P53677 418 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 GRM1Q13255 1194 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 ARHGAP44Q17R89 818 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 ENOSF1Q7L5Y1 443 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 GPR88Q9GZN0 384 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 ABT1Q9ULW3 272 aaKnown RBP27.3■■□□□ 1.96
TRADD-201ENST00000345057 TNPO2O14787 897 aaKnown RBP27.3■■□□□ 1.96
TRADD-201ENST00000345057 TNNI1P19237 187 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 KIF22Q14807 665 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 SURF1Q15526 300 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 ZBTB45Q96K62 511 aaPredicted RBP27.3■■□□□ 1.96
TRADD-201ENST00000345057 NOX5Q96PH1 765 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 POP1Q99575 1024 aaKnown RBP27.3■■□□□ 1.96
TRADD-201ENST00000345057 PRMT7Q9NVM4 692 aaPredicted RBP27.3■■□□□ 1.96
TRADD-201ENST00000345057 TFR2Q9UP52 801 aa27.3■■□□□ 1.96
TRADD-201ENST00000345057 RRN3P2A6NIE6 340 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 A6NJR5 290 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 BTNL10A8MVZ5 291 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 ACOT2P49753 483 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 MCL1Q07820 350 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 PPFIA1Q13136 1202 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 CRELD2Q6UXH1 353 aaPredicted RBP27.29■■□□□ 1.96
TRADD-201ENST00000345057 C15orf39Q6ZRI6 1047 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 TSHZ1Q6ZSZ6 1077 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 IFNLR1Q8IU57 520 aaPredicted RBP27.29■■□□□ 1.96
TRADD-201ENST00000345057 LINC01465Q8N7H1 131 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 HAPLN2Q9GZV7 340 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 NAGPAQ9UK23 515 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 INTUQ9ULD6 942 aa27.29■■□□□ 1.96
TRADD-201ENST00000345057 INO80B-WBP1J3KQ70 363 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 TULP1O00294 542 aaPredicted RBP27.28■■□□□ 1.96
TRADD-201ENST00000345057 PRPF4BQ13523 1007 aaKnown RBP27.28■■□□□ 1.96
TRADD-201ENST00000345057 KIAA0753Q2KHM9 967 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 ALKBH5Q6P6C2 394 aaKnown RBP27.28■■□□□ 1.96
TRADD-201ENST00000345057 MTHFD1LQ6UB35 978 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 ARHGEF19Q8IW93 802 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 MAP7D2Q96T17 732 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 INO80BQ9C086 356 aaPredicted RBP27.28■■□□□ 1.96
TRADD-201ENST00000345057 GNEQ9Y223 722 aaKnown RBP27.28■■□□□ 1.96
TRADD-201ENST00000345057 Q9Y3F1 56 aa27.28■■□□□ 1.96
TRADD-201ENST00000345057 OGTO15294 1046 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 PPM1KQ8N3J5 372 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 CEP112Q8N8E3 955 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms