RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 BACE1P56817 501 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 DR1Q01658 176 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 SNRNP48Q6IEG0 339 aaKnown RBP23.06■■□□□ 1.28
CCDC38-201ENST00000344280 LRIG3Q6UXM1 1119 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 C18orf8Q96DM3 657 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 DOCK5Q9H7D0 1870 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 EXOC7Q9UPT5 735 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 WDR81Q562E7 1941 aa23.06■■□□□ 1.28
CCDC38-201ENST00000344280 CYP11B1P15538 503 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 KCNA2P16389 499 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 MCCD1P59942 119 aaPredicted RBP23.05■■□□□ 1.28
CCDC38-201ENST00000344280 DHX9Q08211 1270 aaKnown RBP23.05■■□□□ 1.28
CCDC38-201ENST00000344280 SWSAP1Q6NVH7 229 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 REPS2Q8NFH8 660 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 TATDN2Q93075 761 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 ZSWIM1Q9BR11 485 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 KIAA1217Q5T5P2 1943 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 PARP14Q460N5 1801 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 NFKBIEO00221 500 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 DLATP10515 647 aaKnown RBP23.05■■□□□ 1.28
CCDC38-201ENST00000344280 CCND2P30279 289 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 HPDP32754 393 aaPredicted RBP23.05■■□□□ 1.28
CCDC38-201ENST00000344280 PEX5P50542 639 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 TCEAL1Q15170 157 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 SAMD3Q8N6K7 520 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 POMGNT1Q8WZA1 660 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 VTI1AQ96AJ9 217 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 PI4K2AQ9BTU6 479 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 TMEM8AQ9HCN3 771 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 RGS17Q9UGC6 210 aaPredicted RBP23.05■■□□□ 1.28
CCDC38-201ENST00000344280 TRPC6Q9Y210 931 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 COQ4Q9Y3A0 265 aa23.05■■□□□ 1.28
CCDC38-201ENST00000344280 HMGB1P1B2RPK0 211 aaPredicted RBP23.04■■□□□ 1.28
CCDC38-201ENST00000344280 MFAP3P55082 362 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 EMC10Q5UCC4 262 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 DUPD1Q68J44 220 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 SV2AQ7L0J3 742 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 C1orf131Q8NDD1 294 aaKnown RBP23.04■■□□□ 1.28
CCDC38-201ENST00000344280 NTPCRQ9BSD7 190 aaKnown RBP23.04■■□□□ 1.28
CCDC38-201ENST00000344280 XPNPEP1Q9NQW7 623 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 FAM114A2Q9NRY5 505 aa23.04■■□□□ 1.28
CCDC38-201ENST00000344280 COL11A1P12107 1806 aaPredicted RBP23.04■■□□□ 1.28
CCDC38-201ENST00000344280 TCRBV7S2A1N4TA0A589 114 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 MYZAPP0CAP1 466 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 GZMAP12544 262 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 GMPSP49915 693 aaPredicted RBP23.03■■□□□ 1.28
CCDC38-201ENST00000344280 GPC3P51654 580 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 HMGCS2P54868 508 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 TAS1R3Q7RTX0 852 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 CCDC60Q8IWA6 550 aaPredicted RBP23.03■■□□□ 1.28
CCDC38-201ENST00000344280 PRELID2Q8N945 189 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 MFSD14AQ96MC6 490 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 FBXL18Q96ME1 805 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 ERP44Q9BS26 406 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 NUP85Q9BW27 656 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 RAB20Q9NX57 234 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 ZNFX1Q9P2E3 1918 aaKnown RBP23.03■■□□□ 1.28
CCDC38-201ENST00000344280 PYGMP11217 842 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 LSP1P33241 339 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 JAMLQ86YT9 394 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 SLC17A8Q8NDX2 589 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 FBXL13Q8NEE6 735 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 CD101Q93033 1021 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 GPRASP2Q96D09 838 aa23.03■■□□□ 1.28
CCDC38-201ENST00000344280 NAP1L3Q99457 506 aaPredicted RBP23.03■■□□□ 1.28
CCDC38-201ENST00000344280 ZNF214Q9UL59 606 aaPredicted RBP23.03■■□□□ 1.28
CCDC38-201ENST00000344280 GOLGA6L10A0A0M3HER8 536 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 HNRNPDLO14979 420 aaKnown RBP23.02■■□□□ 1.28
CCDC38-201ENST00000344280 CYP24A1Q07973 514 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 TTC27Q6P3X3 843 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 UBL4BQ8N7F7 174 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 ZNF564Q8TBZ8 553 aaPredicted RBP23.02■■□□□ 1.28
CCDC38-201ENST00000344280 DDX1Q92499 740 aaKnown RBP23.02■■□□□ 1.28
CCDC38-201ENST00000344280 SENP7Q9BQF6 1050 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 ZDHHC18Q9NUE0 388 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 ATP8A1Q9Y2Q0 1164 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 RLFQ13129 1914 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 GOLGA6L10A6NI86 522 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 MIF4GDA9UHW6 222 aaKnown RBP23.02■■□□□ 1.28
CCDC38-201ENST00000344280 GRIN3BO60391 1043 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 LMBRD2Q68DH5 695 aaPredicted RBP23.02■■□□□ 1.28
CCDC38-201ENST00000344280 SPIRE2Q8WWL2 714 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 KIFAP3Q92845 792 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 ZNF653Q96CK0 615 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 FMO2Q99518 471 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 PDLIM7Q9NR12 457 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 SNX24Q9Y343 169 aa23.02■■□□□ 1.28
CCDC38-201ENST00000344280 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 PTPRAP18433 802 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 TMEM132BQ14DG7 1078 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 LLGL1Q15334 1064 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
CCDC38-201ENST00000344280 OTUD6AQ7L8S5 288 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 ZNF280CQ8ND82 737 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 NT5C1BQ96P26 610 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 RPS6KC1Q96S38 1066 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 WRNIP1Q96S55 665 aa23.01■■□□□ 1.27
CCDC38-201ENST00000344280 FAM213AQ9BRX8 229 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms