RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SGO2Q562F6 1265 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SPATA33Q96N06 139 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SENP7Q9BQF6 1050 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 GPC3P51654 580 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 PPATQ06203 517 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 C2orf54Q08AI8 447 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 LAMC2Q13753 1193 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 IL17AQ16552 155 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 WDR93Q6P2C0 686 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 CCDC121Q6ZUS5 278 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 CARD9Q9H257 536 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 CYP26B1Q9NR63 512 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 GTF3C4Q9UKN8 822 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 VEGFAP15692 232 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 HSD17B4P51659 736 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SLC12A2P55011 1212 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 RPS6KC1Q96S38 1066 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 LTBP3Q9NS15 1303 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 CES2O00748 559 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 FGGP02679 453 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 RPLP2P05387 115 aaKnown RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 PRKCBP05771 671 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ZNF699Q32M78 642 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 C1orf228Q6PIY5 440 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ZNF564Q8TBZ8 553 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 NLRP7Q8WX94 980 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 NFIBO00712 420 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 TXNP10599 105 aaKnown RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SLC9A1P19634 815 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ADCY8P40145 1251 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 PRKCIP41743 596 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ZNF280AP59817 542 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 C12orf56Q8IXR9 622 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 FBXO41Q8TF61 875 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 SLC35C1Q96A29 364 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ELP3Q9H9T3 547 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 RSPH14Q9UHP6 348 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 NAGPAQ9UK23 515 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 IGBP1P78318 339 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 FMO2Q99518 471 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 FTLP02792 175 aaPredicted RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 PTPRAP18433 802 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 GALCP54803 685 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 C1orf186Q6ZWK4 172 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 CYFIP1Q7L576 1253 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ERICH1Q86X53 443 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 COG1Q8WTW3 980 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ERAP1Q9NZ08 941 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 PON1P27169 355 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 HOXD10P28358 340 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 PTGER2P43116 358 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 TFDP2Q14188 446 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZNF484Q5JVG2 852 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 METTL23Q86XA0 190 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ST7Q9NRC1 585 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 INTS13Q9NVM9 706 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 IP6K2Q9UHH9 426 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 SIK3Q9Y2K2 1263 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 TOGARAM1Q9Y4F4 1720 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 SRGAP2CP0DJJ0 459 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 SGSM1Q2NKQ1 1148 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 METTL7BQ6UX53 244 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ARMCX2Q7L311 632 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 CD302Q8IX05 232 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 RHOT1Q8IXI2 618 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 DDX56Q9NY93 547 aaKnown RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 AKAP3O75969 853 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 GUCY2FP51841 1108 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 PMS1P54277 932 aaKnown RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZC2HC1CQ53FD0 456 aaPredicted RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 CATSPER4Q7RTX7 472 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 SAAL1Q96ER3 474 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 GCOM2Q9BZD3 368 aaPredicted RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 RRN3P2A6NIE6 340 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZRANB2O95218 330 aaKnown RBP eCLIP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 KRT7P08729 469 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ENPEPQ07075 957 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 NFRKBQ6P4R8 1299 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 EEPD1Q7L9B9 569 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZBED2Q9BTP6 218 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 CAPS2Q9BXY5 557 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 DPH5Q9H2P9 285 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ANAPC7Q9UJX3 599 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ATP8B3O60423 1300 aa8.12□□□□□ -1.11
HIPK1-201ENST00000340480 ZSCAN20P17040 1043 aaPredicted RBP8.11□□□□□ -1.11
HIPK1-201ENST00000340480 KIAA1841Q6NSI8 718 aa8.11□□□□□ -1.11
HIPK1-201ENST00000340480 BEST2Q8NFU1 509 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms