RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 TIMP1P01033 207 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 MBTPS1Q14703 1052 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 XXYLT1Q8NBI6 393 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 TRIM43Q96BQ3 446 aaPredicted RBP16.11■□□□□ 0.17
CSRP1-201ENST00000340006 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 PDZD7Q9H5P4 517 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
CSRP1-201ENST00000340006 MAGEC2Q9UBF1 373 aaPredicted RBP16.11■□□□□ 0.17
CSRP1-201ENST00000340006 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
CSRP1-201ENST00000340006 EEF1DP3Q658K8 133 aa16.1■□□□□ 0.17
CSRP1-201ENST00000340006 SLC27A1Q6PCB7 646 aa16.1■□□□□ 0.17
CSRP1-201ENST00000340006 THNSL1Q8IYQ7 743 aa16.1■□□□□ 0.17
CSRP1-201ENST00000340006 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
CSRP1-201ENST00000340006 FAM213AQ9BRX8 229 aa16.1■□□□□ 0.17
CSRP1-201ENST00000340006 A0A0B4J269 797 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 KIAA0355O15063 1070 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 NBNO60934 754 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 IBSPP21815 317 aaPredicted RBP16.09■□□□□ 0.17
CSRP1-201ENST00000340006 ACOT2P49753 483 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 OSTNP61366 133 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
CSRP1-201ENST00000340006 SEZ6Q53EL9 994 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 FILIP1Q7Z7B0 1213 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 HAPLN2Q9GZV7 340 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 WNT8AQ9H1J5 351 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 PTPRHQ9HD43 1115 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 STYXL1Q9Y6J8 313 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 SCN5AQ14524 2016 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 AP5Z1O43299 807 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 NPTXRO95502 500 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 PSMC2P35998 433 aaKnown RBP16.09■□□□□ 0.17
CSRP1-201ENST00000340006 MCL1Q07820 350 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 MYBPC2Q14324 1141 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 NFIL3Q16649 462 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 SLC9A9Q8IVB4 645 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 C12orf56Q8IXR9 622 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 GPD1LQ8N335 351 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 TMEM199Q8N511 208 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 SEPT8Q92599 483 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 CEP63Q96MT8 703 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 THAP9Q9H5L6 903 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 DMAC2Q9NW81 257 aa16.09■□□□□ 0.17
CSRP1-201ENST00000340006 KIAA0391O15091 583 aaKnown RBP16.08■□□□□ 0.16
CSRP1-201ENST00000340006 MCF2P10911 925 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 EPB41P11171 864 aaKnown RBP16.08■□□□□ 0.16
CSRP1-201ENST00000340006 PROZP22891 400 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 CASP4P49662 377 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 ZSWIM2Q8NEG5 633 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 ADAM2Q99965 735 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 CDT1Q9H211 546 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 KIAA1586Q9HCI6 787 aa16.08■□□□□ 0.16
CSRP1-201ENST00000340006 ZNF233A6NK53 670 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 OGTO15294 1046 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 EXTL3O43909 919 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 AKAP3O75969 853 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 GNA14O95837 355 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 ITGB8P26012 769 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
CSRP1-201ENST00000340006 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 FAM186BQ8IYM0 893 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 ANKRD20A12PQ8NF67 263 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
CSRP1-201ENST00000340006 GPNMBQ14956 572 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 SNRNP35Q16560 246 aaKnown RBP16.07■□□□□ 0.16
CSRP1-201ENST00000340006 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 MFSD5Q6N075 450 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
CSRP1-201ENST00000340006 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 TMX1Q9H3N1 280 aa16.07■□□□□ 0.16
CSRP1-201ENST00000340006 ALPK3Q96L96 1907 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 KCNJ18B7U540 433 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 ADCY5O95622 1261 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 KRT13P13646 458 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 CSF2RAP15509 400 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 SYN1P17600 705 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 RFC2P35250 354 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 KCNJ12Q14500 433 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 CBWD2Q8IUF1 395 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 TMEM174Q8WUU8 243 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 APBB2Q92870 758 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 APOL6Q9BWW8 343 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 ARMCX3Q9UH62 379 aaPredicted RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 HES2Q9Y543 173 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 ABLIM1O14639 778 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 TNFSF9P41273 254 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 KYAT1Q16773 422 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 TCP11X2Q5H9J9 407 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms