RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 AGGF1Q8N302 714 aaeCLIP21.81■■□□□ 1.08
RUNX3-202ENST00000338888 BORCS6Q96GS4 357 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 RPS6KC1Q96S38 1066 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 KIAA1683Q9H0B3 1180 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 CHKBQ9Y259 395 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 CETPP11597 493 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 FMO5P49326 533 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 NBPF20Q3BBV1 942 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 PWWP2AQ96N64 755 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 JMJD4Q9H9V9 463 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 DNM3Q9UQ16 869 aa21.81■■□□□ 1.08
RUNX3-202ENST00000338888 E7ENQ6 273 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 FOXN3O00409 490 aaPredicted RBP21.8■■□□□ 1.08
RUNX3-202ENST00000338888 TGFB1I1O43294 461 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ENTPD5O75356 428 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 GGPS1O95749 300 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 TTC4O95801 387 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 EPHB2P29323 1055 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 POLGP54098 1239 aaPredicted RBP21.8■■□□□ 1.08
RUNX3-202ENST00000338888 STRN3Q13033 797 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 CYP1B1Q16678 543 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 C11orf63Q6NUN7 778 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 FAM196AQ6ZSG2 479 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 CLEC10AQ8IUN9 316 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 GRAMD1AQ96CP6 724 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 RUSC1Q9BVN2 902 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 TBC1D10AQ9BXI6 508 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 PSTPIP2Q9H939 334 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L15C9J2P7 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L13C9JLJ4 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L11C9JVI0 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L18D6R9N7 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L22D6RA61 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L17D6RBQ6 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L19D6RCP7 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L20D6RJB6 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 RPS6KA3P51812 740 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ROR2Q01974 943 aaKnown RBP21.8■■□□□ 1.08
RUNX3-202ENST00000338888 KLC1Q07866 573 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L24Q0WX57 530 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 SIX1Q15475 284 aaPredicted RBP21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ZNF746Q6NUN9 644 aaPredicted RBP21.8■■□□□ 1.08
RUNX3-202ENST00000338888 USP17L6PQ6QN14 398 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 MFN1Q8IWA4 741 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ADGRF4Q8IZF3 695 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ASAP3Q8TDY4 903 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 C1orf54Q8WWF1 131 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 DNAJC9Q8WXX5 260 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 LRRC37BQ96QE4 947 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 AGPAT1Q99943 283 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 DNAJC18Q9H819 358 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 ASIC3Q9UHC3 531 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 C2CD2Q9Y426 696 aa21.8■■□□□ 1.08
RUNX3-202ENST00000338888 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 NPTXRO95502 500 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 TRIM49P0CI25 452 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 TRIM49CP0CI26 452 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 TTBK2Q6IQ55 1244 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 RNF207Q6ZRF8 634 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 SYT2Q8N9I0 419 aaPredicted RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 BTBD6Q96KE9 485 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 DLGAP2Q9P1A6 1054 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 NAALADL1Q9UQQ1 740 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 ATMINO43313 823 aaPredicted RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 THAP12O43422 761 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 ATP5HO75947 161 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 DLATP10515 647 aaKnown RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 PSMC2P35998 433 aaKnown RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 SLC16A2P36021 539 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 KRT17Q04695 432 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 DNAJC3Q13217 504 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 TRIP13Q15645 432 aaPredicted RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 SPOCK2Q92563 424 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 INTS2Q9H0H0 1204 aaKnown RBP21.79■■□□□ 1.08
RUNX3-202ENST00000338888 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
RUNX3-202ENST00000338888 CHRNB2P17787 502 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 RFC5P40937 340 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 PPP4CP60510 307 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 RNF220Q5VTB9 566 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.78■■□□□ 1.08
RUNX3-202ENST00000338888 SLC7A6OSQ96CW6 309 aaPredicted RBP21.78■■□□□ 1.08
RUNX3-202ENST00000338888 APEX2Q9UBZ4 518 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 BCS1LQ9Y276 419 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 FRMPD4Q14CM0 1322 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 GPR75-ASB3A0A0A6YYF3 556 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 ONECUT3O60422 494 aaPredicted RBP21.78■■□□□ 1.08
RUNX3-202ENST00000338888 CBX6O95503 412 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 LBRQ14739 615 aaKnown RBP21.78■■□□□ 1.08
RUNX3-202ENST00000338888 TSNAXIP1Q2TAA8 658 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 ASPRV1Q53RT3 343 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 PPP1R15BQ5SWA1 713 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 KSR1Q8IVT5 923 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 C7orf43Q8WVR3 580 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 ASB3Q9Y575 518 aa21.78■■□□□ 1.08
RUNX3-202ENST00000338888 T-ENOLP0DO92 83 aa21.77■■□□□ 1.08
RUNX3-202ENST00000338888 HADHBP55084 474 aaKnown RBP21.77■■□□□ 1.08
RUNX3-202ENST00000338888 WDR4P57081 412 aaKnown RBP21.77■■□□□ 1.08
RUNX3-202ENST00000338888 GPC5P78333 572 aa21.77■■□□□ 1.08
RUNX3-202ENST00000338888 IL9RQ01113 521 aa21.77■■□□□ 1.08
RUNX3-202ENST00000338888 CYP4A11Q02928 519 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms