RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 PBXIP1Q96AQ6 731 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 CCDC51Q96ER9 411 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 NFKBIZQ9BYH8 718 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 BHMT2Q9H2M3 363 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 DDX19AQ9NUU7 478 aaKnown RBP14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 LIMD1Q9UGP4 676 aa14.79□□□□□ -0.04
NUDCD3-201ENST00000338427 SFI1A8K8P3 1242 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 INPPL1O15357 1258 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 TEX28O15482 410 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 PDGFBP01127 241 aaPredicted RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 SOD2P04179 222 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 ASGR2P07307 311 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 CLCN4P51793 760 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 ATAT1Q5SQI0 421 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 MCTP1Q6DN14 999 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 KCNK18Q7Z418 384 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 CABP7Q86V35 215 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 PALB2Q86YC2 1186 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 TMX3Q96JJ7 454 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 FBXL18Q96ME1 805 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 PLIN2Q99541 437 aa14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 MRPL17Q9NRX2 175 aaKnown RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 PRMT7Q9NVM4 692 aaPredicted RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 NOL7Q9UMY1 257 aaKnown RBP14.78□□□□□ -0.04
NUDCD3-201ENST00000338427 FSD2A1L4K1 749 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 PRKCBP05771 671 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 RPL17P18621 184 aaKnown RBP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 TRAPPC10P48553 1259 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 ITIH3Q06033 890 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 PRPF4BQ13523 1007 aaKnown RBP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 PDIA5Q14554 519 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 PCBP1Q15365 356 aaKnown RBP eCLIP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 ZRSR1Q15695 479 aaKnown RBP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 FAM187BQ17R55 369 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 TMEM132AQ24JP5 1023 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 ZBTB8OSQ8IWT0 167 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 RNF168Q8IYW5 571 aaPredicted RBP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 DEPTORQ8TB45 409 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 SNX29Q8TEQ0 813 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 HASPINQ8TF76 798 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 RPS6KC1Q96S38 1066 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 HERC2P3Q9BVR0 1158 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 CCDC113Q9H0I3 377 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 GDAQ9Y2T3 454 aa14.77□□□□□ -0.05
NUDCD3-201ENST00000338427 WDFY4Q6ZS81 3184 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 CASTOR2A6NHX0 329 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 ACKR2O00590 384 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 PTGESO14684 152 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 GJB2P29033 226 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 MTHFRP42898 656 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 ORC2Q13416 577 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 GIT2Q14161 759 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 RABEP1Q15276 862 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 PTPN21Q16825 1174 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 PRSS55Q6UWB4 352 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 GPR149Q86SP6 731 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 ZBTB33Q86T24 672 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 DAW1Q8N136 415 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 ASIC4Q96FT7 647 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
NUDCD3-201ENST00000338427 TDRD15B5MCY1 1934 aaKnown RBP14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 TADA2AO75478 443 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 RFPL2O75678 378 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 BRD1O95696 1058 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 URODP06132 367 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 NAMPTP43490 491 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 PEX3P56589 373 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 DSG1Q02413 1049 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 RAD51AP2Q09MP3 1159 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 MAPK6Q16659 721 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 FUT10Q6P4F1 479 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 BMP8AQ7Z5Y6 402 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 ALYREFQ86V81 257 aaKnown RBP14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 ST13P5Q8NFI4 369 aaPredicted RBP14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 RIN2Q8WYP3 895 aaPredicted RBP14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 MFSD14AQ96MC6 490 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 RIPOR3Q96MK2 946 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 PNMA5Q96PV4 448 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 RXFP1Q9HBX9 757 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 MAN1C1Q9NR34 630 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 CHST7Q9NS84 486 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 DZANK1Q9NVP4 752 aa14.75□□□□□ -0.05
NUDCD3-201ENST00000338427 CCDC195A0A1B0GUA6 201 aa14.74□□□□□ -0.05
NUDCD3-201ENST00000338427 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
NUDCD3-201ENST00000338427 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
NUDCD3-201ENST00000338427 N4BP3O15049 544 aa14.74□□□□□ -0.05
NUDCD3-201ENST00000338427 HIP1RO75146 1068 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms