RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 DGKIO75912 1065 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 HARSP12081 509 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 PROZP22891 400 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 PPP1R2P41236 205 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 MCL1Q07820 350 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 KCNA1Q09470 495 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 STIM1Q13586 685 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 TMCO2Q7Z6W1 182 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 NELFCDQ8IXH7 590 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 CRIPAKQ8N1N5 446 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 GUF1Q8N442 669 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 TRIML1Q8N9V2 468 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 GLIS3Q8NEA6 775 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 SYAP1Q96A49 352 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 ACAP3Q96P50 834 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 TMEM117Q9H0C3 514 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 CDT1Q9H211 546 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 GIT1Q9Y2X7 761 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 STYXL1Q9Y6J8 313 aa13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 MKI67P46013 3256 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-202ENST00000337841 A0A0B4J269 797 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 OGTO15294 1046 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 CLTAP09496 248 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 GARTP22102 1010 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 GRM5P41594 1212 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 RABGGTBP53611 331 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 LPPQ93052 612 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 TOPORSQ9NS56 1045 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 AGO2Q9UKV8 859 aaKnown RBP13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 HES2Q9Y543 173 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
SPTLC1-202ENST00000337841 SCN5AQ14524 2016 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 TBKBP1A7MCY6 615 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 BIN1O00499 593 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 PDXKO00764 312 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 ABLIM1O14639 778 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 CALUO43852 315 aaPredicted RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 OFD1O75665 1012 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 FGFR1P11362 822 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 AKAP5P24588 427 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 HOXD13P35453 343 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 OSTNP61366 133 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 MORC3Q14149 939 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 COBLL1Q53SF7 1204 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 NOMO2Q5JPE7 1267 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 ARMCX5Q6P1M9 558 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 CMTR2Q8IYT2 770 aaKnown RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 FIBCD1Q8N539 461 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 HELQQ8TDG4 1101 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 KIAA1586Q9HCI6 787 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
SPTLC1-202ENST00000337841 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 TET1Q8NFU7 2136 aa13□□□□□ -0.33
SPTLC1-202ENST00000337841 TANC1Q9C0D5 1861 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 CEP290O15078 2479 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 TGFB1I1O43294 461 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 PRCPP42785 496 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 POU5F1Q01860 360 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 SLC39A4Q6P5W5 647 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 DHTKD1Q96HY7 919 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 RPS6KC1Q96S38 1066 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 GAD1Q99259 594 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 MRPL9Q9BYD2 267 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 PBX4Q9BYU1 374 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms