RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TMEM130Q8N3G9 435 aa24.96■■□□□ 1.59
CLPTM1-201ENST00000337392 SAMD3Q8N6K7 520 aa24.96■■□□□ 1.59
CLPTM1-201ENST00000337392 TSKSQ9UJT2 592 aa24.96■■□□□ 1.59
CLPTM1-201ENST00000337392 BTNL10A8MVZ5 291 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 GJB1P08034 283 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 GLRA2P23416 452 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 CYP24A1Q07973 514 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 XRRA1Q6P2D8 792 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 HELQQ8TDG4 1101 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 CASKIN2Q8WXE0 1202 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 COPS5Q92905 334 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 TARS2Q9BW92 718 aaKnown RBP24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 CELF4Q9BZC1 486 aaKnown RBP24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 STXBP5LQ9Y2K9 1186 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 GSTTP1A0A1W2PQM5 241 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 MKRN4PQ13434 485 aaPredicted RBP24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 MYBPC2Q14324 1141 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 KRT39Q6A163 491 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 CCDC70Q6NSX1 233 aa24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 ASCC2Q9H1I8 757 aaPredicted RBP24.95■■□□□ 1.58
CLPTM1-201ENST00000337392 EIF3JO75822 258 aaKnown RBP24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 YBX3P16989 372 aaKnown RBP eCLIP24.94■■□□□ 1.581e-8■■□□□ 12.9
CLPTM1-201ENST00000337392 SH3D19Q5HYK7 790 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 RFFLQ8WZ73 363 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 KRT35Q92764 455 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 NTPCRQ9BSD7 190 aaKnown RBP24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 CTTNBP2NLQ9P2B4 639 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 ARHGAP28Q9P2N2 729 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 EXOC7Q9UPT5 735 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 FARP2O94887 1054 aaPredicted RBP24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 OATP04181 439 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 KRT5P13647 590 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 LIG4P49917 911 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 IRX3P78415 501 aaPredicted RBP24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 HSDL1Q3SXM5 330 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 XKR3Q5GH77 459 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 TRAPPC12Q8WVT3 735 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 ALG3Q92685 438 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 AMACRQ9UHK6 382 aa24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 NOCTQ9UK39 431 aaKnown RBP24.94■■□□□ 1.58
CLPTM1-201ENST00000337392 OTOFQ9HC10 1997 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 LMAN1P49257 510 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 MKRN3Q13064 507 aaKnown RBP24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 SLFN11Q7Z7L1 901 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 CDR2LQ86X02 465 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 CCDC125Q86Z20 511 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 RAB20Q9NX57 234 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 RNF40O75150 1001 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 GGPS1O95749 300 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 TMEM253P0C7T8 217 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 ITIH3Q06033 890 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 GJC2Q5T442 439 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 GPD1LQ8N335 351 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 LRRC71Q8N4P6 559 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 RDM1Q8NG50 284 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 IFT74Q96LB3 600 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 FBXO40Q9UH90 709 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 MAFBQ9Y5Q3 323 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 SBF1O95248 1867 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 NFASCO94856 1347 aa24.93■■□□□ 1.58
CLPTM1-201ENST00000337392 MAP9Q49MG5 647 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 DAB2IPQ5VWQ8 1189 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 MCPH1Q8NEM0 835 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 SPIRE2Q8WWL2 714 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 ADARB2Q9NS39 739 aaKnown RBP24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 CNMDO75829 334 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 FGGP02679 453 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 TNNI1P19237 187 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 TCF7P36402 384 aaPredicted RBP24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 FMO1Q01740 532 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 PPATQ06203 517 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 FAM71AQ8IYT1 594 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 FBXL13Q8NEE6 735 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 IWS1Q96ST2 819 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 TIPINQ9BVW5 301 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 PNMA2Q9UL42 364 aa24.92■■□□□ 1.58
CLPTM1-201ENST00000337392 ZNFX1Q9P2E3 1918 aaKnown RBP24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 CFHP08603 1231 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 MESDQ14696 234 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 FBXO16Q8IX29 292 aaPredicted RBP24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 HES6Q96HZ4 224 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 CDHR1Q96JP9 859 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 TRIM31Q9BZY9 425 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 TMEM8AQ9HCN3 771 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 KRIT1O00522 736 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 ERVK-9P63128 1117 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 HSP90B2PQ58FF3 399 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 MFSD14AQ96MC6 490 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 TRIM7Q9C029 511 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 FAM204AQ9H8W3 233 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 ERVK-5Q9HDB9 667 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 AMFRQ9UKV5 643 aa24.91■■□□□ 1.58
CLPTM1-201ENST00000337392 CYP11B1P15538 503 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 CHST13Q8NET6 341 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 FBXL18Q96ME1 805 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 PPP1R16BQ96T49 567 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 TMEM59LQ9UK28 342 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 PPP2R3BQ9Y5P8 575 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 ANKRD62A6NC57 917 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms