RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 AGTP01019 485 aa13.83□□□□□ -0.19
HLCS-201ENST00000336648 EFNA5P52803 228 aa13.83□□□□□ -0.19
HLCS-201ENST00000336648 PDIA2Q13087 525 aaKnown RBP13.83□□□□□ -0.19
HLCS-201ENST00000336648 KHDRBS2Q5VWX1 349 aaKnown RBP13.83□□□□□ -0.19
HLCS-201ENST00000336648 ZNF772Q68DY9 489 aaPredicted RBP13.83□□□□□ -0.19
HLCS-201ENST00000336648 RRM2BQ7LG56 351 aa13.83□□□□□ -0.19
HLCS-201ENST00000336648 TSSK1BQ9BXA7 367 aa13.83□□□□□ -0.19
HLCS-201ENST00000336648 ABCF3Q9NUQ8 709 aa13.83□□□□□ -0.19
HLCS-201ENST00000336648 GPS1Q13098 491 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 TTLL4Q14679 1199 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 LRIG3Q6UXM1 1119 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 GOLPH3LQ9H4A5 285 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 ECT2Q9H8V3 914 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 GSNP06396 782 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
HLCS-201ENST00000336648 RAD23BP54727 409 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 EGFL8Q99944 293 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 HEMGNQ9BXL5 484 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 KCNJ6P48051 423 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 CUL3Q13618 768 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 DRAP1Q14919 205 aaPredicted RBP13.83□□□□□ -0.2
HLCS-201ENST00000336648 KRT72Q14CN4 511 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 UGP2Q16851 508 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 DALRD3Q5D0E6 543 aaKnown RBP13.83□□□□□ -0.2
HLCS-201ENST00000336648 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.2
HLCS-201ENST00000336648 GPD1LQ8N335 351 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 PHF21AQ96BD5 680 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 USP6P35125 1406 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 TYK2P29597 1187 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 PRCPP42785 496 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 SERPINB9P50453 376 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 UBE3AQ05086 875 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 PLD3Q8IV08 490 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 KRT35Q92764 455 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 VIPAS39Q9H9C1 493 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 ETNK1Q9HBU6 452 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 SUGT1Q9Y2Z0 365 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
HLCS-201ENST00000336648 UTYO14607 1347 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ARHGEF5Q12774 1597 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 CCDC78A2IDD5 438 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ORC4O43929 436 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 MYL3P08590 195 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 CCDC137Q6PK04 289 aaKnown RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 TSPAN17Q96FV3 270 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 FAM49AQ9H0Q0 323 aaPredicted RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 DPYSL4O14531 572 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 SASH1O94885 1247 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 FTLP02792 175 aaPredicted RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 DEPDC1Q5TB30 811 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 CMTM5Q96DZ9 223 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 CDHR2Q9BYE9 1310 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 NLRP1Q9C000 1473 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ADCY3O60266 1144 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 RALAP11233 206 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 GFPT1Q06210 699 aaPredicted RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 ACBD5Q5T8D3 534 aaPredicted RBP13.82□□□□□ -0.2
HLCS-201ENST00000336648 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ATL2Q8NHH9 583 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 TNIP3Q96KP6 325 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 NSMCE4AQ9NXX6 385 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 BLOC1S6Q9UL45 172 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 APOL1O14791 398 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 HIC1Q14526 733 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 IZUMO3Q5VZ72 239 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 SEPT3Q9UH03 358 aa13.82□□□□□ -0.2
HLCS-201ENST00000336648 LARGE1O95461 756 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 GH2P01242 217 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 FBXW4P57775 412 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 ACTN3Q08043 901 aaPredicted RBP13.81□□□□□ -0.2
HLCS-201ENST00000336648 NUDT18Q6ZVK8 323 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 ZBED8Q8IZ13 594 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 KCNA1Q09470 495 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 WASHC5Q12768 1159 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 TWF2Q6IBS0 349 aaKnown RBP13.81□□□□□ -0.2
HLCS-201ENST00000336648 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 PIGOQ8TEQ8 1089 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 BARHL2Q9NY43 387 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 UVRAGQ9P2Y5 699 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
HLCS-201ENST00000336648 PDXKO00764 312 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms