RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 COG5Q9UP83 839 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
DDX28-201ENST00000332395 SYNGAP1Q96PV0 1343 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 GOLGA6BA6NDN3 693 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 AGPSO00116 658 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 ATG7O95352 703 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 ATP4AP20648 1035 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 GTF2H1P32780 548 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 ALDH5A1P51649 535 aaPredicted RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 POLGP54098 1239 aaPredicted RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 NOP9Q86U38 636 aaKnown RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 RHOT2Q8IXI1 618 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 IPO4Q8TEX9 1081 aaKnown RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 CWC15Q9P013 229 aaKnown RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 BTBD7Q9P203 1132 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 NOCTQ9UK39 431 aaKnown RBP18.77■□□□□ 0.6
DDX28-201ENST00000332395 A0A0G2JMZ2 1700 aa18.77■□□□□ 0.6
DDX28-201ENST00000332395 CYP26A1O43174 497 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 OATP04181 439 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 DLATP10515 647 aaKnown RBP18.76■□□□□ 0.59
DDX28-201ENST00000332395 ABCD1P33897 745 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 PAK2Q13177 524 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 HELQQ8TDG4 1101 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 RIN2Q8WYP3 895 aaPredicted RBP18.76■□□□□ 0.59
DDX28-201ENST00000332395 NT5C1BQ96P26 610 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 AP1M1Q9BXS5 423 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 NFU1Q9UMS0 254 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 CHRNB2P17787 502 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 HADHBP55084 474 aaKnown RBP18.76■□□□□ 0.59
DDX28-201ENST00000332395 NNTQ13423 1086 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 SV2AQ7L0J3 742 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 SLC47A2Q86VL8 602 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 RIOX2Q8IUF8 465 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 CASKIN2Q8WXE0 1202 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 IFT81Q8WYA0 676 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 PCDHB18PQ96TA0 734 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 FAM213AQ9BRX8 229 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 FBXO40Q9UH90 709 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 CSADQ9Y600 493 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 OTOFQ9HC10 1997 aa18.76■□□□□ 0.59
DDX28-201ENST00000332395 KRIT1O00522 736 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 DDX3YO15523 660 aaKnown RBP18.75■□□□□ 0.59
DDX28-201ENST00000332395 RTN2O75298 545 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 ENPEPQ07075 957 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 PRPF4BQ13523 1007 aaKnown RBP18.75■□□□□ 0.59
DDX28-201ENST00000332395 TMEM143Q96AN5 459 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 ACP6Q9NPH0 428 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 KCNG1Q9UIX4 513 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 PAPPA2Q9BXP8 1791 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 CCDC188H7C350 402 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
DDX28-201ENST00000332395 LIG4P49917 911 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 TSEN2Q8NCE0 465 aaKnown RBP18.75■□□□□ 0.59
DDX28-201ENST00000332395 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
DDX28-201ENST00000332395 FAM204AQ9H8W3 233 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 CTTNBP2NLQ9P2B4 639 aa18.75■□□□□ 0.59
DDX28-201ENST00000332395 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 GZMAP12544 262 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 LMAN1P49257 510 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 GPC5P78333 572 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 TCEAL1Q15170 157 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 PORCNQ9H237 461 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 TTC7AQ9ULT0 858 aaPredicted RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 ADM5C9JUS6 153 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 SART1O43290 800 aaKnown RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 EXTL3O43909 919 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 STRN3Q13033 797 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 DCAF12L1Q5VU92 463 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 GADL1Q6ZQY3 521 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 ASAP3Q8TDY4 903 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 SPATC1LQ9H0A9 340 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 DDX47Q9H0S4 455 aaKnown RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 RASSF4Q9H2L5 321 aa18.74■□□□□ 0.59
DDX28-201ENST00000332395 ADARB2Q9NS39 739 aaKnown RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 DIS3Q9Y2L1 958 aaKnown RBP18.74■□□□□ 0.59
DDX28-201ENST00000332395 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 MYO1CO00159 1063 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 MMEP08473 750 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 FAM153BP0C7A2 387 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 ITGA4P13612 1032 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 CYP11B1P15538 503 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 EDNRBP24530 442 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 FMO1Q01740 532 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 TRADDQ15628 312 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 FAM153CQ494X1 144 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 NCAPG2Q86XI2 1143 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 SULF1Q8IWU6 871 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 SLC7A3Q8WY07 619 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 ELMO3Q96BJ8 720 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 DCPSQ96C86 337 aaKnown RBP18.73■□□□□ 0.59
DDX28-201ENST00000332395 CARD9Q9H257 536 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 KIAA1586Q9HCI6 787 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 FAM153AQ9UHL3 310 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 SBF1O95248 1867 aa18.73■□□□□ 0.59
DDX28-201ENST00000332395 SOWAHBA6NEL2 793 aa18.72■□□□□ 0.59
DDX28-201ENST00000332395 FARP2O94887 1054 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms