RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ALDH2P05091 517 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 ITGB1P05556 798 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 GAP43P17677 238 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 CMA1P23946 247 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 AKAP5P24588 427 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 ANP32AP39687 249 aaKnown RBP15.38■□□□□ 0.05
LIMS1-201ENST00000332345 BCAR1P56945 870 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 TAS1R3Q7RTX0 852 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 DHX58Q96C10 678 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 GAD1Q99259 594 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
LIMS1-201ENST00000332345 MAGEF1Q9HAY2 307 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 HCSTQ9UBK5 93 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 KCNH3Q9ULD8 1083 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 K7ENM7 598 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 INPPL1O15357 1258 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIMS1-201ENST00000332345 NR1I2O75469 434 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 POMCP01189 267 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 EDN1P05305 212 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 IDEP14735 1019 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 E2F4Q16254 413 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 TIGD5Q53EQ6 642 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 HERC4Q5GLZ8 1057 aaPredicted RBP15.37■□□□□ 0.05
LIMS1-201ENST00000332345 EEF1DP3Q658K8 133 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 ZPBP2Q6X784 338 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 CCDC65Q8IXS2 484 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 POF1BQ8WVV4 589 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 DNAJC19Q96DA6 116 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 RPS6KC1Q96S38 1066 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 SNTG2Q9NY99 539 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 LZTS1Q9Y250 596 aa15.37■□□□□ 0.05
LIMS1-201ENST00000332345 ZMYM2Q9UBW7 1377 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 EYSQ5T1H1 3165 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MYO7AQ13402 2215 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 CLDN3O15551 220 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 TOM1L1O75674 476 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 GALTP07902 379 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MCF2P10911 925 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MLH1P40692 756 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 AFF1P51825 1210 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 GTF2BQ00403 316 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 BMS1Q14692 1282 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 ZNF568Q3ZCX4 644 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 PDE12Q6L8Q7 609 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MPZL3Q6UWV2 235 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 ZNF720Q7Z2F6 126 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 ZNF280BQ86YH2 543 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 CEP57L1Q8IYX8 460 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 BICD1Q96G01 975 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 TMEM175Q9BSA9 504 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 ST6GALNAC4Q9H4F1 302 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 MRPL44Q9H9J2 332 aaKnown RBP15.36■□□□□ 0.05
LIMS1-201ENST00000332345 PANK4Q9NVE7 773 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 KLK14Q9P0G3 267 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 FAN1Q9Y2M0 1017 aa15.36■□□□□ 0.05
LIMS1-201ENST00000332345 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
LIMS1-201ENST00000332345 DDHD2O94830 711 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 PROZP22891 400 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 NMT1P30419 496 aaKnown RBP15.35■□□□□ 0.05
LIMS1-201ENST00000332345 PBX3P40426 434 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 MATR3P43243 847 aaKnown RBP eCLIP15.35■□□□□ 0.051e-8■■■□□ 14.8
LIMS1-201ENST00000332345 LIG4P49917 911 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
LIMS1-201ENST00000332345 ZBTB33Q86T24 672 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 STAMQ92783 540 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 ZFP42Q96MM3 310 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 C7orf25Q9BPX7 421 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 NSUN3Q9H649 340 aaKnown RBP15.35■□□□□ 0.05
LIMS1-201ENST00000332345 MIOSQ9NXC5 875 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 STK39Q9UEW8 545 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 USP25Q9UHP3 1055 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
LIMS1-201ENST00000332345 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 PCDHB13Q9Y5F0 798 aa15.35■□□□□ 0.05
LIMS1-201ENST00000332345 A0A1B0GVL5 298 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 NT5C1B-RDH14C9J2C7 533 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 NCK2O43639 380 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 RECQL4O94761 1208 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 THP07101 528 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 SLFN14P0C7P3 912 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 DNAJB1P25685 340 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 GRM5P41594 1212 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 SCNN1GP51170 649 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms