RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 LIMCH1Q9UPQ0 1083 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 IGKV6-21A0A0C4DH24 114 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 ENPP3O14638 875 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 GPR182O15218 404 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 LPXNO60711 386 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 MMP1P03956 469 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 GHRP10912 638 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 FDPSP14324 419 aaKnown RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 KRT2P35908 639 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 CRYBB1P53674 252 aaPredicted RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 PRKCEQ02156 737 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 PAK2Q13177 524 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 C8orf34Q49A92 452 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 TBCELQ5QJ74 424 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMG1-201ENST00000330588 MIER3Q7Z3K6 550 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 CKAP2LQ8IYA6 745 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 CMTR2Q8IYT2 770 aaKnown RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 NEK9Q8TD19 979 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 P2RX5Q93086 422 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 PRIMPOLQ96LW4 560 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 MAP7D2Q96T17 732 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 TSPAN10Q9H1Z9 355 aaPredicted RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 UNC45AQ9H3U1 944 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 ERVK-5Q9HDB9 667 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 THEGQ9P2T0 379 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 DDX25Q9UHL0 483 aaKnown RBP7.11□□□□□ -1.27
SMG1-201ENST00000330588 MTCH2Q9Y6C9 303 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 TTC3P53804 2025 aa7.11□□□□□ -1.27
SMG1-201ENST00000330588 ADGRA3Q8IWK6 1321 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 NLRC5Q86WI3 1866 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 H3BNC9 293 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 DDX39AO00148 427 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 ZNF862O60290 1169 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 GPR32O75388 356 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 DGKIO75912 1065 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 LYPLA2O95372 231 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 BAG4O95429 457 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 TDP2O95551 362 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 P4HBP07237 508 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 WEE1P30291 646 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 SARSP49591 514 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 PSMC5P62195 406 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 IGBP1P78318 339 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 GRB10Q13322 594 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 TRIM29Q14134 588 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 COL19A1Q14993 1142 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 PTPROQ16827 1216 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 INF2Q27J81 1249 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 TIGD5Q53EQ6 642 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 ZNF410Q86VK4 478 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 C4orf19Q8IY42 314 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 MRPL38Q96DV4 380 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 CEP89Q96ST8 783 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 YME1L1Q96TA2 773 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 FAM49AQ9H0Q0 323 aaPredicted RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 AGO3Q9H9G7 860 aaKnown RBP7.1□□□□□ -1.27
SMG1-201ENST00000330588 PADI3Q9ULW8 664 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
SMG1-201ENST00000330588 FSD2A1L4K1 749 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 LCHNA4D1U4 455 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 EPOPA6NHQ4 379 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 NCK2O43639 380 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 SLC37A4O43826 429 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 RPS6KA5O75582 802 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 STBD1O95210 358 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 LARGE1O95461 756 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 MUTP22033 750 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 IGFBP4P22692 258 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 CD52P31358 61 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 DNM2P50570 870 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 FAM189BP81408 668 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 MRPS5P82675 430 aaKnown RBP7.09□□□□□ -1.27
SMG1-201ENST00000330588 SPIRE1Q08AE8 756 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 TBC1D8BQ0IIM8 1120 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 DSC3Q14574 896 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 RABEP1Q15276 862 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 PCBP1Q15365 356 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMG1-201ENST00000330588 EPHA7Q15375 998 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 RSPO4Q2I0M5 234 aaPredicted RBP7.09□□□□□ -1.27
SMG1-201ENST00000330588 LETM2Q2VYF4 491 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 NKAPLQ5M9Q1 402 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 PIK3AP1Q6ZUJ8 805 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 SLC24A5Q71RS6 500 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 TMEM192Q8IY95 271 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 FIBCD1Q8N539 461 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 TRAPPC12Q8WVT3 735 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 LINC01599Q8WXQ3 324 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 KIF2CQ99661 725 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 HINFPQ9BQA5 517 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 C11orf84Q9BUA3 381 aaPredicted RBP7.09□□□□□ -1.27
SMG1-201ENST00000330588 OSBPL7Q9BZF2 842 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 INO80BQ9C086 356 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms