RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 RPL21P46778 160 aaKnown RBP16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CCDC137Q6PK04 289 aaKnown RBP16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CPLX4Q7Z7G2 160 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CCDC13Q8IYE1 715 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CACNA2D3Q8IZS8 1091 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PLEKHO2Q8TD55 490 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 MORC4Q8TE76 937 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PGM2Q96G03 612 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CEP89Q96ST8 783 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 KCNH7Q9NS40 1196 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PARP2Q9UGN5 583 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 GZMAP12544 262 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 RARRES1P49788 294 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 MXI1P50539 228 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 SLC29A2Q14542 456 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 TNIP1Q15025 636 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 TBC1D10BQ4KMP7 808 aaPredicted RBP16.52■□□□□ 0.24
BRCC3-201ENST00000330045 ERMARDQ5T6L9 678 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 EPS8L1Q8TE68 723 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 MTRF1LQ9UGC7 380 aaKnown RBP16.52■□□□□ 0.24
BRCC3-201ENST00000330045 PGAP2Q9UHJ9 254 aa16.52■□□□□ 0.24
BRCC3-201ENST00000330045 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
BRCC3-201ENST00000330045 RPTORQ8N122 1335 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 TLDC2A0PJX2 215 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 MTA2O94776 668 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 CHRNB2P17787 502 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 GMPSP49915 693 aaPredicted RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 MNAT1P51948 309 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 GKAP1Q5VSY0 366 aaPredicted RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 NOP9Q86U38 636 aaKnown RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 FAM71AQ8IYT1 594 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 TMEM117Q9H0C3 514 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 ACTR5Q9H9F9 607 aaPredicted RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 NOCTQ9UK39 431 aaKnown RBP16.52■□□□□ 0.23
BRCC3-201ENST00000330045 FEM1BQ9UK73 627 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 TRPC6Q9Y210 931 aa16.52■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 MAPK13O15264 365 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 ATMINO43313 823 aaPredicted RBP16.51■□□□□ 0.23
BRCC3-201ENST00000330045 PYGMP11217 842 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 HSD17B4P51659 736 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 GTF2BQ00403 316 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 HAUS6Q7Z4H7 955 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 CD101Q93033 1021 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 SEMA4AQ9H3S1 761 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■■ 96.1
BRCC3-201ENST00000330045 CNOT7Q9UIV1 285 aaKnown RBP16.51■□□□□ 0.23
BRCC3-201ENST00000330045 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 PMM2O15305 246 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 DHX15O43143 795 aaKnown RBP16.51■□□□□ 0.23
BRCC3-201ENST00000330045 CYP26A1O43174 497 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
BRCC3-201ENST00000330045 DRD4P21917 467 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 SMTNP53814 917 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 RASA3Q14644 834 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 MICALL2Q8IY33 904 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 PPM1KQ8N3J5 372 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 MTUS1Q9ULD2 1270 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 USP20Q9Y2K6 914 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 PCDHA3Q9Y5H8 950 aa16.51■□□□□ 0.23
BRCC3-201ENST00000330045 RGS16O15492 202 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 ALAS1P13196 640 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CHN1P15882 459 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 MMP13P45452 471 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 QARSP47897 775 aaKnown RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 DGKZQ13574 1117 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 C6orf118Q5T5N4 469 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SLC47A2Q86VL8 602 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CCDC105Q8IYK2 499 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 ZNF564Q8TBZ8 553 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 AGBL1Q96MI9 1066 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 KREMEN1Q96MU8 473 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 FAM129AQ9BZQ8 928 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 ACP6Q9NPH0 428 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SMIM23A6NLE4 172 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SPOPO43791 374 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 MMEP08473 750 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 COILP38432 576 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 MFAP3P55082 362 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 SNRPFP62306 86 aaKnown RBP16.5■□□□□ 0.23
BRCC3-201ENST00000330045 ADCY2Q08462 1091 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
BRCC3-201ENST00000330045 CROCCP2Q86T23 111 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms