RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
SYNM-201ENST00000328642 CAPN9O14815 690 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 LIG3P49916 1009 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 ATP11AP98196 1134 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 ALCAMQ13740 583 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 MMS22LQ6ZRQ5 1243 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 CCDC121Q6ZUS5 278 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 RFX6Q8HWS3 928 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 RGS7P49802 495 aa17.16■□□□□ 0.34
SYNM-201ENST00000328642 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
SYNM-201ENST00000328642 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
SYNM-201ENST00000328642 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
SYNM-201ENST00000328642 CTSHP09668 335 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 FGFR4P22455 802 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
SYNM-201ENST00000328642 HNRNPH2P55795 449 aaKnown RBP17.15■□□□□ 0.34
SYNM-201ENST00000328642 SLC8A3P57103 927 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 VGLL4Q14135 290 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 C1orf186Q6ZWK4 172 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 NKIRAS1Q9NYS0 192 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 INPP5FQ9Y2H2 1132 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ZRANB2O95218 330 aaKnown RBP eCLIP17.15■□□□□ 0.34
SYNM-201ENST00000328642 GJB6O95452 261 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ECEL1O95672 775 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
SYNM-201ENST00000328642 COMTP21964 271 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 PLA2G4AP47712 749 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ZBTB16Q05516 673 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 NCOA4Q13772 614 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 AMHR2Q16671 573 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 MICALCLQ6ZW33 695 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 RHOT2Q8IXI1 618 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 LRP6O75581 1613 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 M0QZ92 97 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ITGA4P13612 1032 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
SYNM-201ENST00000328642 EFCAB12Q6NXP0 572 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 SV2AQ7L0J3 742 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 ARHGEF19Q8IW93 802 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
SYNM-201ENST00000328642 DNAI2Q9GZS0 605 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 SLC38A10Q9HBR0 1119 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 PASKQ96RG2 1323 aa17.15■□□□□ 0.34
SYNM-201ENST00000328642 NUMBP49757 651 aa17.14■□□□□ 0.34
SYNM-201ENST00000328642 PPP3CAQ08209 521 aa17.14■□□□□ 0.34
SYNM-201ENST00000328642 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.34
SYNM-201ENST00000328642 EDEM3Q9BZQ6 932 aa17.14■□□□□ 0.34
SYNM-201ENST00000328642 TAS2R14Q9NYV8 317 aa17.14■□□□□ 0.34
SYNM-201ENST00000328642 STRCP1A6NGW2 1772 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 ABCC6O95255 1503 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 CCL15-CCL14A0A0B4J2E2 113 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 P4HA1P13674 534 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 POLR2BP30876 1174 aaKnown RBP17.14■□□□□ 0.33
SYNM-201ENST00000328642 MNAT1P51948 309 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 CCL15Q16663 113 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 SLC5A5Q92911 643 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.33
SYNM-201ENST00000328642 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
SYNM-201ENST00000328642 MYO9BQ13459 2157 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 VTNP04004 478 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 PSMA2P25787 234 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 NME8Q8N427 588 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 ZSWIM2Q8NEG5 633 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
SYNM-201ENST00000328642 AP5M1Q9H0R1 490 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 HEY1Q9Y5J3 304 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
SYNM-201ENST00000328642 A0A1W2PQJ5 194 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 SMTNL2Q2TAL5 461 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 FBXL5Q9UKA1 691 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 LRRIQ3A6PVS8 624 aaPredicted RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 SLC16A3O15427 465 aaKnown RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 DAB2IPQ5VWQ8 1189 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 TWF2Q6IBS0 349 aaKnown RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 CCNI2Q6ZMN8 369 aaPredicted RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 ANKZF1Q9H8Y5 726 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 SASH3O75995 380 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 DSG3P32926 999 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 GPC3P51654 580 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
SYNM-201ENST00000328642 PCNX4Q63HM2 1172 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 CCDC137Q6PK04 289 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms