RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 GPC5P78333 572 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 CRYMQ14894 314 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 SLC30A9Q6PML9 568 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 PRCCQ92733 491 aaPredicted RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 ZNF233A6NK53 670 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 AADACL2Q6P093 401 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 TGS1Q96RS0 853 aaKnown RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 NYAP2Q9P242 653 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 CACNA1FO60840 1977 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 CAND2O75155 1236 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 KRT1P04264 644 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 BASP1P80723 227 aaKnown RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 CCHCR1Q8TD31 782 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 LRRC10BA6NIK2 292 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 NAB2Q15742 525 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 PALM2Q8IXS6 379 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 SPATA20Q8TB22 786 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 ATG4AQ8WYN0 398 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 KAT5Q92993 513 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
VARS2-201ENST00000321897 ALG6Q9Y672 507 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 MAD1L1Q9Y6D9 718 aa16.28■□□□□ 0.2
VARS2-201ENST00000321897 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
VARS2-201ENST00000321897 RXRBP28702 533 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 RWDD2BP57060 319 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.2
VARS2-201ENST00000321897 AMPD2Q01433 879 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 SLC29A2Q14542 456 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 BBS9Q3SYG4 887 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 PHLDB3Q6NSJ2 640 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 RFFLQ8WZ73 363 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
VARS2-201ENST00000321897 CSADQ9Y600 493 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
VARS2-201ENST00000321897 ESYT2A0FGR8 921 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 ADCY2Q08462 1091 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 SWT1Q5T5J6 900 aaKnown RBP16.27■□□□□ 0.2
VARS2-201ENST00000321897 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 RUNDC3BQ96NL0 473 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.2
VARS2-201ENST00000321897 ZNF263O14978 683 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.19
VARS2-201ENST00000321897 AP1G2O75843 785 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 UBOX5O94941 541 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 SAT1P21673 171 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 DRP2Q13474 957 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 ANKRD20A8PQ5CZ79 823 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 TRIM59Q8IWR1 403 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 SYT2Q8N9I0 419 aaPredicted RBP16.27■□□□□ 0.19
VARS2-201ENST00000321897 AGPAT1Q99943 283 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 AGPAT3Q9NRZ7 376 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.19
VARS2-201ENST00000321897 LGR5O75473 907 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 YWHAGP61981 247 aaKnown RBP eCLIP16.26■□□□□ 0.19
VARS2-201ENST00000321897 ARHGEF18Q6ZSZ5 1173 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 TXLNGQ9NUQ3 528 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 WDR64B1ANS9 1081 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 NALCNQ8IZF0 1738 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 RASA4BC9J798 803 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 H7C0C1 242 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 AGPSO00116 658 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 RASA4O43374 803 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 DKC1O60832 514 aaKnown RBP eCLIP16.26■□□□□ 0.19
VARS2-201ENST00000321897 CSDE1O75534 798 aaKnown RBP16.26■□□□□ 0.19
VARS2-201ENST00000321897 MAP3K6O95382 1288 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 SKIP12755 728 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 COMTP21964 271 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 ATP5OP48047 213 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 TXNDC16Q9P2K2 825 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 MRC1P22897 1456 aa16.26■□□□□ 0.19
VARS2-201ENST00000321897 GRID2IPA4D2P6 1211 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 ORC1Q13415 861 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 AKT3Q9Y243 479 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 MYO3BQ8WXR4 1341 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 FSBPO95073 299 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms