RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 MCF2L2Q86YR7 1114 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 FMNL3Q8IVF7 1028 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 PPM1KQ8N3J5 372 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 KDM4CQ9H3R0 1056 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 NFKBIEO00221 500 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ZBED4O75132 1171 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 CLTAP09496 248 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 TNFAIP3P21580 790 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ZNF131P52739 623 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 JAM2P57087 298 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 CBWD2Q8IUF1 395 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 KIF4AO95239 1232 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 PAEPP09466 180 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 METTL13Q8N6R0 699 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 TPCN2Q8NHX9 752 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 APEX2Q9UBZ4 518 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 PPP1R9AQ9ULJ8 1098 aa16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
SHROOM1-201ENST00000319854 CCT8L1PA6NM43 557 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 DAPK3O43293 454 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 IFFO1Q0D2I5 559 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 GRIK3Q13003 919 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 BIRC3Q13489 604 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 LMBRD2Q68DH5 695 aaPredicted RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 PHLDB2Q86SQ0 1253 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 TBC1D1Q86TI0 1168 aaPredicted RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC35G2Q8TBE7 412 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 BUB1BO60566 1050 aaPredicted RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 FERP16591 822 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 VAMP7P51809 220 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 TNNC1P63316 161 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 ANGEL2Q5VTE6 544 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 GABBR1Q9UBS5 961 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 SEL1LQ9UBV2 794 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 SYNPO2Q9UMS6 1093 aa16.72■□□□□ 0.27
SHROOM1-201ENST00000319854 ANP32DO95626 131 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 B3GNT9Q6UX72 402 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 MAB21L3Q8N8X9 362 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 PLEKHO2Q8TD55 490 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 CEP170P1Q96L14 293 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 STK33Q9BYT3 514 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 EBF2Q9HAK2 575 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 ANKRD63C9JTQ0 380 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 VWA5AO00534 786 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 KRT71Q3SY84 523 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 PCNX4Q63HM2 1172 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 AADACL2Q6P093 401 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 CYFIP1Q7L576 1253 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 NLRX1Q86UT6 975 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 ZNF483Q8TF39 744 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 SPDL1Q96EA4 605 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 UBIAD1Q9Y5Z9 338 aa16.71■□□□□ 0.27
SHROOM1-201ENST00000319854 KRIT1O00522 736 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 PLS3P13797 630 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 RUFY4Q6ZNE9 571 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 ACCSQ96QU6 501 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 CELF4Q9BZC1 486 aaKnown RBP16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 KIF9Q9HAQ2 790 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 AMACRQ9UHK6 382 aa16.71■□□□□ 0.26
SHROOM1-201ENST00000319854 GHRP10912 638 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 EPC2Q52LR7 807 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 AGBL2Q5U5Z8 902 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 EGFL6Q8IUX8 553 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 LMBR1Q8WVP7 490 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 LPAR1Q92633 364 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 LRRC45Q96CN5 670 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 CHMP6Q96FZ7 201 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 GPR88Q9GZN0 384 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 DENND3A2RUS2 1198 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 ADRB2P07550 413 aa16.7■□□□□ 0.26
SHROOM1-201ENST00000319854 FAM133BQ5BKY9 247 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms