RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MTMR8Q96EF0 704 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 TRIM11Q96F44 468 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 LACRTQ9GZZ8 138 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 MRPL47Q9HD33 250 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 PLCB1Q9NQ66 1216 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 DBR1Q9UK59 544 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 UBE4BO95155 1302 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 GLTPD2A6NH11 291 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 M0R2N6 131 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 PLA2G6O60733 806 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ADCY8P40145 1251 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 HSD17B4P51659 736 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 UGCGQ16739 394 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ABI1Q8IZP0 508 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 OSBPL9Q96SU4 736 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 C17orf75Q9HAS0 396 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 COL22A1Q8NFW1 1626 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 CNTNAP1P78357 1384 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ADAMTS7Q9UKP4 1686 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 A0A1W2PQJ5 194 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 FOXN3O00409 490 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 MAGEB2O15479 319 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ABL1P00519 1130 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 VTNP04004 478 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 RNASELQ05823 741 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 DGKDQ16760 1214 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 TMEM35BQ8NCS4 154 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 DNAJC7Q99615 494 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 LRRD1A4D1F6 860 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 UAP1Q16222 522 aaPredicted RBP9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 CDO1Q16878 200 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 RNF10Q8N5U6 811 aaKnown RBP9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 FAM76AQ8TAV0 307 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 NUP85Q9BW27 656 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 WDR70Q9NW82 654 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 TRAF3IP3Q9Y228 551 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 MRFAP1Q9Y605 127 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 ANO9A1A5B4 782 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 E7EVH7 732 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 MED7O43513 233 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 TGFB3P10600 412 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 CAPN12Q6ZSI9 719 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 CCDC89Q8N998 374 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 ACAP3Q96P50 834 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 FAM204AQ9H8W3 233 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 TMEM8AQ9HCN3 771 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 ARHGAP20Q9P2F6 1191 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 TTLL3Q9Y4R7 772 aa9.96□□□□□ -0.81
TMEM39A-201ENST00000319172 EXTL3O43909 919 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 TBXAS1P24557 533 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 ADCYAP1R1P41586 468 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 TJP1Q07157 1748 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 KIZQ2M2Z5 673 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 UBR2Q8IWV8 1755 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 ZNF564Q8TBZ8 553 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 TAS1R2Q8TE23 839 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 CLEC4DQ8WXI8 215 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 CPA5Q8WXQ8 436 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 SLC35C1Q96A29 364 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 HEMGNQ9BXL5 484 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 CALN1Q9BXU9 219 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 NACA2Q9H009 215 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 KCNK9Q9NPC2 374 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 H3BRB1 525 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 ATMINO43313 823 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 KRT1P04264 644 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 INSRRP14616 1297 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 RFX1P22670 979 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 TRIP13Q15645 432 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 KRT71Q3SY84 523 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 SGO2Q562F6 1265 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 LRRC55Q6ZSA7 311 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 MAIP1Q8WWC4 291 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 PBKQ96KB5 322 aa9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 FEZ2Q9UHY8 353 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-201ENST00000319172 IGLV3-22A0A075B6J6 115 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 GOLGA6CA6NDK9 693 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CCNE2O96020 404 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 GOLGA6DP0CG33 693 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 RARBP10826 455 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 NAMPTP43490 491 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 NOP14P78316 857 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 BSPRYQ5W0U4 402 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 GSPT2Q8IYD1 628 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 RFFLQ8WZ73 363 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 NGRNQ9NPE2 291 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 GOLGA6AQ9NYA3 693 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 SNCAIPQ9Y6H5 919 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ABCA3Q99758 1704 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms