RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ANKRD36CQ5JPF3 1778 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 NCANO14594 1321 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 GSTTP1A0A1W2PQM5 241 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 A0A1W2PRG0 241 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PEX11AO75192 247 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PAPOLAP51003 745 aaKnown RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 KRT17Q04695 432 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ICA1Q05084 483 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ORC2Q13416 577 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TMED2Q15363 201 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 RNF220Q5VTB9 566 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 CYP4F22Q6NT55 531 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PHLDB2Q86SQ0 1253 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 LMNTD2Q8IXW0 634 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 FAM13CQ8NE31 585 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TEKT4Q8WW24 435 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ZNF287Q9HBT7 754 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PCDHA3Q9Y5H8 950 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 GOLGB1Q14789 3259 aaKnown RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 PDXKO00764 312 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ECEL1O95672 775 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 CHRNB2P17787 502 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 CALB2P22676 271 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 RFC5P40937 340 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 DRG2P55039 364 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 SIK1P57059 783 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 SETDB1Q15047 1291 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 MUM1Q2TAK8 710 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 UCMAQ8WVF2 138 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ART4Q93070 314 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 RUNDC3BQ96NL0 473 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 RAB3IPQ96QF0 476 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 STK33Q9BYT3 514 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 METTL14Q9HCE5 456 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 METTL5Q9NRN9 209 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 TYW1Q9NV66 732 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 RGL1Q9NZL6 768 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 SNED1Q8TER0 1413 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 O00370 1275 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ZBTB39O15060 712 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 PECAM1P16284 738 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 PTDSS1P48651 473 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 FMO5P49326 533 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 POLE2P56282 527 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 MFSD5Q6N075 450 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 RNF207Q6ZRF8 634 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 ZC3H3Q8IXZ2 948 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 CEP120Q8N960 986 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 PCYOX1Q9UHG3 505 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 DIS3Q9Y2L1 958 aaKnown RBP10.34□□□□□ -0.75
PTPRA-202ENST00000318266 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
PTPRA-202ENST00000318266 TPBGLP0DKB5 382 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 APLP1P51693 650 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 RWDD2BP57060 319 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TNFAIP8L3Q5GJ75 292 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 C16orf86Q6ZW13 317 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 CROCCP2Q86T23 111 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 STK32AQ8WU08 396 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 LRRC37BQ96QE4 947 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 INTS2Q9H0H0 1204 aaKnown RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TXLNGQ9NUQ3 528 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 RASA4BC9J798 803 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TGFB1I1O43294 461 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 RASA4O43374 803 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 CHMP2AO43633 222 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 AKR1B1P15121 316 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TAC1P20366 129 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 RAB27AP51159 221 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 SF3B3Q15393 1217 aaKnown RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 PHLDB3Q6NSJ2 640 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 MIGA2Q7L4E1 593 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 APBB1IPQ7Z5R6 666 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 SLC13A5Q86YT5 568 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 RPUSD2Q8IZ73 545 aaKnown RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TBC1D10AQ9BXI6 508 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 UBE2TQ9NPD8 197 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-202ENST00000318266 NAALADL1Q9UQQ1 740 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF652Q9Y2D9 606 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 A0A1B0GVG6 124 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 KLHL33A6NCF5 533 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 TTLL1O95922 423 aa10.33□□□□□ -0.76
PTPRA-202ENST00000318266 CCNB1P14635 433 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms