RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MXD3Q9BW11 206 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GLT8D2Q9H1C3 349 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 DCLRE1BQ9H816 532 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 BARHL2Q9NY43 387 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SEC63Q9UGP8 760 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 USP15Q9Y4E8 981 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 HYOU1Q9Y4L1 999 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 UBE4BO95155 1302 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 FAM205AQ6ZU69 1335 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SCN4AP35499 1836 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 A0A0G2JS52 829 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ZSCAN5CA6NGD5 496 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 TEX28O15482 410 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CYP2C9P11712 490 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RGS2P41220 211 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PRKCIP41743 596 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PAFAH1B1P43034 410 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 GRIN1Q05586 938 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 KLHL35Q6PF15 583 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 LCORLQ8N3X6 602 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RASGEF1CQ8N431 466 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ESX1Q8N693 406 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ATXN2LQ8WWM7 1075 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CASKIN2Q8WXE0 1202 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 P2RX5Q93086 422 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PHKBQ93100 1093 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SKA1Q96BD8 255 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 NMD3Q96D46 503 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 AIFM3Q96NN9 605 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 UBAC1Q9BSL1 405 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 DPH5Q9H2P9 285 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RPAP3Q9H6T3 665 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PARVBQ9HBI1 364 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ETNK1Q9HBU6 452 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RXFP1Q9HBX9 757 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RBM12Q9NTZ6 932 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 AIPL1Q9NZN9 384 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ZMAT5Q9UDW3 170 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 MTUS1Q9ULD2 1270 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 NUTM2BA6NNL0 878 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 NUTM2EB1AL46 878 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CBFA2T3O75081 653 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 DGKIO75912 1065 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 FBXO21O94952 628 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SNHG28P0DPA3 235 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CHN1P15882 459 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CCR3P51677 355 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CTAG1AP78358 180 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 RNASELQ05823 741 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CUL1Q13616 776 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC6Q16204 474 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 BMT2Q1RMZ1 405 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SNX30Q5VWJ9 437 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 INTS5Q6P9B9 1019 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 Q6ZNX1 250 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 BARGINQ6ZT62 677 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SLFN11Q7Z7L1 901 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PATL1Q86TB9 770 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 MICU3Q86XE3 530 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 FAM186BQ8IYM0 893 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ST13P4Q8IZP2 240 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 PIGBQ92521 554 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 USP6NLQ92738 828 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC127Q96BQ5 260 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 ITPKCQ96DU7 683 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 MTMR8Q96EF0 704 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 HSPBAP1Q96EW2 488 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 STK32BQ9NY57 414 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SCHIP1Q9P0W5 487 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
ZNF540-201ENST00000316433 CD2APQ9Y5K6 639 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 SSC5DA1L4H1 1573 aa7.1□□□□□ -1.27
ZNF540-201ENST00000316433 MAGEB6P1A0A0J9YX57 407 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 SMIM31A0A1B0GVY4 71 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 A0A1W2PQ67 120 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 TTC26A0AVF1 554 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 O00370 1275 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 ECE2O60344 883 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 STAM2O75886 525 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 SUN1O94901 812 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 UNC5CO95185 931 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 CPA3P15088 417 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 RXRGP48443 463 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 CBLBQ13191 982 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 ITGA9Q13797 1035 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 UAP1Q16222 522 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-201ENST00000316433 MAN2A1Q16706 1144 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 CHADLQ6NUI6 762 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 UNC13DQ70J99 1090 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 BLIDQ8IZY5 108 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 AGGF1Q8N302 714 aaeCLIP7.09□□□□□ -1.27
ZNF540-201ENST00000316433 ACTRT1Q8TDG2 376 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 FBXO41Q8TF61 875 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 STARD8Q92502 1023 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 BAP1Q92560 729 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 LRRC45Q96CN5 670 aa7.09□□□□□ -1.27
ZNF540-201ENST00000316433 NSMCE3Q96MG7 304 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms