RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SLC26A4O43511 780 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 PTH1RQ03431 593 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 ZNF564Q8TBZ8 553 aaPredicted RBP16.34■□□□□ 0.21
HCFC1-201ENST00000310441 RMDN2Q96LZ7 410 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 G3BP2Q9UN86 482 aaKnown RBP16.34■□□□□ 0.21
HCFC1-201ENST00000310441 BBOX1O75936 387 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 NCALDP61601 193 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 GTF2H3Q13889 308 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 SMYD4Q8IYR2 804 aaPredicted RBP16.34■□□□□ 0.21
HCFC1-201ENST00000310441 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 M0R3G1 203 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 MYH3P11055 1940 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 ANO4Q32M45 955 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 PRPF18Q99633 342 aaKnown RBP16.34■□□□□ 0.21
HCFC1-201ENST00000310441 OSBPL3Q9H4L5 887 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 CDC42EP1Q00587 391 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 FBXO38Q6PIJ6 1188 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 NLRP14Q86W24 1093 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.212e-11■□□□□ 9.1
HCFC1-201ENST00000310441 BRAFP15056 766 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 CNGA2Q16280 664 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 Q3C1V9 767 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 PYCARDQ9ULZ3 195 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 CDY1Q9Y6F8 540 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 NR3C1P04150 777 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 GYG1P46976 350 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 CAPZA2P47755 286 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 CLEC4FQ8N1N0 589 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 SPATA17Q96L03 361 aa16.33■□□□□ 0.21
HCFC1-201ENST00000310441 HMOX2P30519 316 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 FAM47EQ6ZV65 393 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 RIBC1Q8N443 379 aaPredicted RBP16.33■□□□□ 0.2
HCFC1-201ENST00000310441 NMRK1Q9NWW6 199 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 TUBGCP4Q9UGJ1 667 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 ARHGEF5Q12774 1597 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 EPN3Q9H201 632 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 NDUFB9Q9Y6M9 179 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 NBNO60934 754 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 THEMIS2Q5TEJ8 643 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SLC30A9Q6PML9 568 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SPATA16Q9BXB7 569 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 CCDC195A0A1B0GUA6 201 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 DENND3A2RUS2 1198 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SORBS3O60504 671 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 RALAP11233 206 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 CLK1P49759 484 aaKnown RBP16.33■□□□□ 0.2
HCFC1-201ENST00000310441 ZBTB33Q86T24 672 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 AFG1LQ8WV93 481 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 TMEM191CA6NGB0 347 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 BAG6P46379 1132 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 GPC3P51654 580 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 KPNB1Q14974 876 aaKnown RBP16.33■□□□□ 0.2
HCFC1-201ENST00000310441 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 SMARCAD1Q9H4L7 1026 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 USE1Q9NZ43 259 aa16.33■□□□□ 0.2
HCFC1-201ENST00000310441 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ZNF280CQ8ND82 737 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ANXA11P50995 505 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ATP10BO94823 1461 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 TLR2O60603 784 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 SCNN1DP51172 638 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 E4F1Q66K89 784 aaPredicted RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 CCDC137Q6PK04 289 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 CALML6Q8TD86 181 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 TIPINQ9BVW5 301 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 NDFIP2Q9NV92 336 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 TJP2Q9UDY2 1190 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 TMEM270Q6UE05 265 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 NSUN7Q8NE18 718 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 CYGBQ8WWM9 190 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 DPYSL4O14531 572 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 CLASP2O75122 1294 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 A1BGP04217 495 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 GNA15P30679 374 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 SERPINB9P50453 376 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 BCAR1P56945 870 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ZNF235Q14590 738 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 ASNSP08243 561 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 OR6P1Q8NGX9 317 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 SARS2Q9NP81 518 aaKnown RBP16.32■□□□□ 0.2
HCFC1-201ENST00000310441 CDYLQ9Y232 598 aa16.32■□□□□ 0.2
HCFC1-201ENST00000310441 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms