RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 EHMT1Q9H9B1 1298 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ETNK2Q9NVF9 386 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 BTBD7Q9P203 1132 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 WDR37Q9Y2I8 494 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 A6NHS1 94 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 FAM196BA6NMK8 535 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 KRIT1O00522 736 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 EDIL3O43854 480 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 STAT3P40763 770 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 PTDSS1P48651 473 aaKnown RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 TTC1Q99614 292 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 LRCH1Q9Y2L9 728 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 UTRNP46939 3433 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 VHLP40337 213 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 CD151P48509 253 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 GPSM2P81274 684 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 CENPPQ6IPU0 288 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 DAGLBQ8NCG7 672 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 LRRC27Q9C0I9 530 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 RNPEPL1Q9HAU8 725 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 CLIC5Q9NZA1 410 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 PNMA3Q9UL41 463 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ACTN1P12814 892 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 TARSP26639 723 aaKnown RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 RPS6KA1Q15418 735 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 CASKIN2Q8WXE0 1202 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 RABGAP1Q9Y3P9 1069 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 PALMO75781 387 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 AKR1B1P15121 316 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 DRD4P21917 467 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 NCALDP61601 193 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 MAN2A1Q16706 1144 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 KLC3Q6P597 504 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 SLC30A10Q6XR72 485 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ANO5Q75V66 913 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 CAVIN3Q969G5 261 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 DNAJC1Q96KC8 554 aaKnown RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 AK8Q96MA6 479 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 TLR10Q9BXR5 811 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ADAMTS1Q9UHI8 967 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 MEIS1O00470 390 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 FAM163BP0C2L3 166 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L24Q0WX57 530 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ISLR2Q6UXK2 745 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 PIP4K2CQ8TBX8 421 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 BAP1Q92560 729 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 LAD1O00515 517 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 CCR3P51677 355 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ADCY7P51828 1080 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ARPC4P59998 168 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 FAAH2Q6GMR7 532 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ERP27Q96DN0 273 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 TMEM237Q96Q45 408 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 ZMYND8Q9ULU4 1186 aaPredicted RBP11.16□□□□□ -0.62
MSRB3-201ENST00000308259 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 KIAA1024Q9UPX6 916 aa11.16□□□□□ -0.62
MSRB3-201ENST00000308259 TLR2O60603 784 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 PLTPP55058 493 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 SNX30Q5VWJ9 437 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 UBE2Q1Q7Z7E8 422 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 RIBC1Q8N443 379 aaPredicted RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 RAD54LQ92698 747 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 MRRFQ96E11 262 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms