RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 LACTBP83111 547 aaPredicted RBP15.64■□□□□ 0.09
PTPN9-201ENST00000306726 CDC42EP5Q6NZY7 148 aa15.64■□□□□ 0.09
PTPN9-201ENST00000306726 LNX1Q8TBB1 728 aaPredicted RBP15.64■□□□□ 0.09
PTPN9-201ENST00000306726 DTX3LQ8TDB6 740 aa15.64■□□□□ 0.09
PTPN9-201ENST00000306726 PITPNM2Q9BZ72 1349 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 ECM29Q5VYK3 1845 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 F5H6K3 240 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 SGPL1O95470 568 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 CD58P19256 250 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PEX3P56589 373 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 IRX4P78413 519 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 KLRC3Q07444 240 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 OVGP1Q12889 678 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PSMD2Q13200 908 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 DNAJC3Q13217 504 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 NUP85Q9BW27 656 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 ADARB2Q9NS39 739 aaKnown RBP15.63■□□□□ 0.09
PTPN9-201ENST00000306726 ANAPC7Q9UJX3 599 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 ANP32DO95626 131 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 SOX5P35711 763 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 NT5DC3Q86UY8 548 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 C12orf65Q9H3J6 166 aaKnown RBP15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PYGMP11217 842 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PRLRP16471 622 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 C16orf86Q6ZW13 317 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 CBWD1Q9BRT8 395 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PARVGQ9HBI0 331 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 FBXO28Q9NVF7 368 aa15.63■□□□□ 0.09
PTPN9-201ENST00000306726 PRELPP51888 382 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 SMTNP53814 917 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 TRPM8Q7Z2W7 1104 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 LONP2Q86WA8 852 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 METTL5Q9NRN9 209 aaKnown RBP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 ABCB11O95342 1321 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 TARSP26639 723 aaKnown RBP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 FMO5P49326 533 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 FXR2P51116 673 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 ANKMY2Q8IV38 441 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 CEP63Q96MT8 703 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 TGS1Q96RS0 853 aaKnown RBP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 TCHPQ9BT92 498 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 AMNQ9BXJ7 453 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 GANQ9H2C0 597 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 KLHL14Q9P2G3 628 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 ZNF148Q9UQR1 794 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 PCDHGC5Q9Y5F6 944 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 GLTPD2A6NH11 291 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 PPATQ06203 517 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 TAF11Q15544 211 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 ASTE1Q2TB18 679 aaPredicted RBP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 SEZ6Q53EL9 994 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 PPP4R3AQ6IN85 833 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 USP50Q70EL3 339 aaPredicted RBP15.62■□□□□ 0.09
PTPN9-201ENST00000306726 RFFLQ8WZ73 363 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 ATRNL1Q5VV63 1379 aa15.62■□□□□ 0.09
PTPN9-201ENST00000306726 KAT6AQ92794 2004 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 BCRP11274 1271 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ECE1P42892 770 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ATP11AP98196 1134 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 CDK17Q00537 523 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 KRT17Q04695 432 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ZNF577Q9BSK1 485 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 HOMER3Q9NSC5 361 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 DDX60LQ5H9U9 1706 aaKnown RBP15.61■□□□□ 0.09
PTPN9-201ENST00000306726 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ECEL1O95672 775 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 TNNI1P19237 187 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 PDIA5Q14554 519 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 FAM151AQ8WW52 585 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ZNF70Q9UC06 446 aaPredicted RBP15.61■□□□□ 0.09
PTPN9-201ENST00000306726 HACL1Q9UJ83 578 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 A6NNZ2 444 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 CCDC188H7C350 402 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 M0R2N6 131 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 PJA2O43164 708 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 MAP3K6O95382 1288 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 SCN4AP35499 1836 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 NPEPPSP55786 919 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 TUBB8Q3ZCM7 444 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 TAOK1Q7L7X3 1001 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 SLC47A2Q86VL8 602 aa15.61■□□□□ 0.09
PTPN9-201ENST00000306726 SUGP1Q8IWZ8 645 aaKnown RBP15.61■□□□□ 0.09
PTPN9-201ENST00000306726 ZC3H15Q8WU90 426 aaKnown RBP15.61■□□□□ 0.09
PTPN9-201ENST00000306726 RASA4BC9J798 803 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 MSH4O15457 936 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 RASA4O43374 803 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 MAPK4P31152 587 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 CPA2P48052 419 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 AGAP11Q8TF27 550 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 NAP1L3Q99457 506 aaPredicted RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 C11orf70Q9BRQ4 267 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 PITPNM3Q9BZ71 974 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 KIF9Q9HAQ2 790 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 GEMIN8Q9NWZ8 242 aaKnown RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 ANAPC5Q9UJX4 755 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms