RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 HACD3Q9P035 362 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 PIM2Q9P1W9 311 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 RTN2O75298 545 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 RMDN2Q96LZ7 410 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 PDHA1P08559 390 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 ADORA2BP29275 332 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 ARHGEF6Q15052 776 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 SLC18A3Q16572 532 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 SLC8A2Q9UPR5 921 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 MORF4L2Q15014 288 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 DHX35Q9H5Z1 703 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 PDCD6IPQ8WUM4 868 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 GNAT1P11488 350 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 NME3Q13232 169 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 TTC8Q8TAM2 541 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 RNF217Q8TC41 542 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 ITIH6Q6UXX5 1313 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 PYGBP11216 843 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 YWHABP31946 246 aaKnown RBP14.78□□□□□ -0.04
PRKCB-201ENST00000303531 LRRC31Q6UY01 552 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 RUBCNQ92622 972 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 FXR1P51114 621 aaKnown RBP eCLIP14.78□□□□□ -0.043e-6■■□□□ 13.6
PRKCB-201ENST00000303531 CDH6P55285 790 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 TSPY1Q01534 308 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 TTLL4Q14679 1199 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 CEP55Q53EZ4 464 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 GCNAQ96QF7 691 aa14.78□□□□□ -0.04
PRKCB-201ENST00000303531 F8W8V4 182 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 SCP2P22307 547 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 NR1I3Q14994 352 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 LDHDQ86WU2 507 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 PCDHA10Q9Y5I2 948 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 ADRA2BP18089 450 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 KCNJ6P48051 423 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 ICE2Q659A1 982 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 TEX2Q8IWB9 1127 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 C7orf25Q9BPX7 421 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 ACAD9Q9H845 621 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 CDC42BPAQ5VT25 1732 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 PARP9Q8IXQ6 854 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 LMCD1Q9NZU5 365 aa14.77□□□□□ -0.04
PRKCB-201ENST00000303531 CFAP69A5D8W1 941 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 ASAP2O43150 1006 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 HSPA9P38646 679 aaKnown RBP14.77□□□□□ -0.05
PRKCB-201ENST00000303531 EFHC2Q5JST6 749 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 PLA2G12BQ9BX93 195 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 TRIM10Q9UDY6 481 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.05
PRKCB-201ENST00000303531 DUOXA2Q1HG44 320 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 SPATA33Q96N06 139 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 RHOBTB3O94955 611 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 NDUFAF2Q8N183 169 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 KLHL11Q9NVR0 708 aa14.77□□□□□ -0.05
PRKCB-201ENST00000303531 H3BRJ5 948 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 E2F6O75461 281 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 A8MXQ7 604 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 AP2B1P63010 937 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 TAP1Q03518 808 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 BFARQ9NZS9 450 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 MCF2P10911 925 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 HIF1AQ16665 826 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 ZNF710Q8N1W2 664 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 MAGEB5Q9BZ81 275 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 CYP4F11Q9HBI6 524 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 APEX2Q9UBZ4 518 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 CRB1P82279 1406 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 TNS3Q68CZ2 1445 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 ANKMY2Q8IV38 441 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 PRMT1Q99873 361 aaKnown RBP14.76□□□□□ -0.05
PRKCB-201ENST00000303531 MYCP01106 439 aaPredicted RBP14.76□□□□□ -0.05
PRKCB-201ENST00000303531 ARHGDIAP52565 204 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 ATL2Q8NHH9 583 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 MTMR4Q9NYA4 1195 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 ADA2Q9NZK5 511 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 HSPBP1Q9NZL4 362 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 SLC13A4Q9UKG4 626 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 AP3M2P53677 418 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 TRIM51Q9BSJ1 452 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 STK33Q9BYT3 514 aa14.76□□□□□ -0.05
PRKCB-201ENST00000303531 SLC1A1P43005 524 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 REEP2Q9BRK0 252 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 CFAP73A6NFT4 308 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 ITPRIPL1Q6GPH6 555 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 SLC30A5Q8TAD4 765 aa14.75□□□□□ -0.05
PRKCB-201ENST00000303531 POLR3CQ9BUI4 534 aaPredicted RBP14.75□□□□□ -0.05
PRKCB-201ENST00000303531 HERC5Q9UII4 1024 aaKnown RBP14.75□□□□□ -0.05
PRKCB-201ENST00000303531 TYK2P29597 1187 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms