RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CCDC89Q8N998 374 aa15.04■□□□□ -0
SDC2-201ENST00000302190 SLC35C1Q96A29 364 aa15.04■□□□□ -0
SDC2-201ENST00000302190 RMDN3Q96TC7 470 aa15.04■□□□□ -0
SDC2-201ENST00000302190 AGPAT3Q9NRZ7 376 aa15.04■□□□□ -0
SDC2-201ENST00000302190 TCP11X1B4DZS4 312 aa15.04■□□□□ -0
SDC2-201ENST00000302190 SUN1O94901 812 aa15.04■□□□□ -0
SDC2-201ENST00000302190 PRLRP16471 622 aa15.04■□□□□ -0
SDC2-201ENST00000302190 PAX7P23759 505 aa15.04■□□□□ -0
SDC2-201ENST00000302190 ALDH3A1P30838 453 aa15.04■□□□□ -0
SDC2-201ENST00000302190 MYO1EQ12965 1108 aa15.04■□□□□ -0
SDC2-201ENST00000302190 PPP2R5EQ16537 467 aa15.04■□□□□ -0
SDC2-201ENST00000302190 CBWD6Q4V339 395 aa15.04■□□□□ -0
SDC2-201ENST00000302190 CBWD3Q5JTY5 395 aa15.04■□□□□ -0
SDC2-201ENST00000302190 CBWD5Q5RIA9 395 aa15.04■□□□□ -0
SDC2-201ENST00000302190 PRAMEF18Q5VWM3 479 aa15.04■□□□□ -0
SDC2-201ENST00000302190 TMEM270Q6UE05 265 aa15.04■□□□□ -0
SDC2-201ENST00000302190 DLK2Q6UY11 383 aa15.04■□□□□ -0
SDC2-201ENST00000302190 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
SDC2-201ENST00000302190 RAPGEF5Q92565 580 aa15.04■□□□□ -0
SDC2-201ENST00000302190 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
SDC2-201ENST00000302190 TRIM6Q9C030 488 aaPredicted RBP15.04■□□□□ -0
SDC2-201ENST00000302190 CCDC189A1A4V9 331 aa15.03■□□□□ -0
SDC2-201ENST00000302190 SEZ6Q53EL9 994 aa15.03■□□□□ -0
SDC2-201ENST00000302190 BRDTQ58F21 947 aaPredicted RBP15.03■□□□□ -0
SDC2-201ENST00000302190 ERP44Q9BS26 406 aa15.03■□□□□ -0
SDC2-201ENST00000302190 TRIM7Q9C029 511 aa15.03■□□□□ -0
SDC2-201ENST00000302190 SLITRK6Q9H5Y7 841 aa15.03■□□□□ -0
SDC2-201ENST00000302190 MYO3BQ8WXR4 1341 aa15.03■□□□□ -0
SDC2-201ENST00000302190 EXOC1LA0A1B0GW35 172 aa15.03■□□□□ -0
SDC2-201ENST00000302190 ZBED4O75132 1171 aa15.03■□□□□ -0
SDC2-201ENST00000302190 FAM107AO95990 144 aa15.03■□□□□ -0
SDC2-201ENST00000302190 CA4P22748 312 aa15.03■□□□□ -0
SDC2-201ENST00000302190 ACOT2P49753 483 aa15.03■□□□□ -0
SDC2-201ENST00000302190 ORC2Q13416 577 aaPredicted RBP15.03■□□□□ -0
SDC2-201ENST00000302190 HGSNATQ68CP4 663 aa15.03■□□□□ -0
SDC2-201ENST00000302190 SEPT14Q6ZU15 432 aa15.03■□□□□ -0
SDC2-201ENST00000302190 PRMT6Q96LA8 375 aaPredicted RBP15.03■□□□□ -0
SDC2-201ENST00000302190 STK24Q9Y6E0 443 aa15.03■□□□□ -0
SDC2-201ENST00000302190 SCN9AQ15858 1988 aa15.03■□□□□ -0
SDC2-201ENST00000302190 A0A1B0GUL6 1792 aa15.03■□□□□ -0
SDC2-201ENST00000302190 SGPL1O95470 568 aa15.03■□□□□ -0
SDC2-201ENST00000302190 KRT17Q04695 432 aa15.03■□□□□ -0
SDC2-201ENST00000302190 KRT35Q92764 455 aa15.03■□□□□ -0
SDC2-201ENST00000302190 MIEF2Q96C03 454 aa15.03■□□□□ -0
SDC2-201ENST00000302190 TMEM206Q9H813 350 aa15.03■□□□□ -0
SDC2-201ENST00000302190 TOPORSQ9NS56 1045 aaPredicted RBP15.03■□□□□ -0
SDC2-201ENST00000302190 FGFR1OP2Q9NVK5 253 aa15.03■□□□□ -0
SDC2-201ENST00000302190 MARK3P27448 753 aa15.02■□□□□ -0
SDC2-201ENST00000302190 PTGER2P43116 358 aa15.02■□□□□ -0
SDC2-201ENST00000302190 MARCKSL1P49006 195 aa15.02■□□□□ -0
SDC2-201ENST00000302190 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
SDC2-201ENST00000302190 NBPF20Q3BBV1 942 aa15.02■□□□□ -0
SDC2-201ENST00000302190 DAB2IPQ5VWQ8 1189 aa15.02■□□□□ -0
SDC2-201ENST00000302190 PODNQ7Z5L7 613 aa15.02■□□□□ -0
SDC2-201ENST00000302190 CBWD2Q8IUF1 395 aa15.02■□□□□ -0
SDC2-201ENST00000302190 SAYSD1Q9NPB0 183 aa15.02■□□□□ -0
SDC2-201ENST00000302190 RAB20Q9NX57 234 aa15.02■□□□□ -0
SDC2-201ENST00000302190 INTUQ9ULD6 942 aa15.02■□□□□ -0
SDC2-201ENST00000302190 SYNGAP1Q96PV0 1343 aa15.02■□□□□ -0
SDC2-201ENST00000302190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.02□□□□□ -0.01
SDC2-201ENST00000302190 DCDC2CA8MYV0 355 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 RASA4BC9J798 803 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 GOLGA8RI6L899 631 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 RASA4O43374 803 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 NOL4O94818 638 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 IFI35P80217 286 aaPredicted RBP15.02□□□□□ -0.01
SDC2-201ENST00000302190 TMEM119Q4V9L6 283 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 C6orf118Q5T5N4 469 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.02□□□□□ -0.01
SDC2-201ENST00000302190 PAGR1Q9BTK6 254 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 MAK16Q9BXY0 300 aaKnown RBP15.02□□□□□ -0.01
SDC2-201ENST00000302190 HSPBP1Q9NZL4 362 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 MYH8P13535 1937 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 EIF3BP55884 814 aaKnown RBP15.02□□□□□ -0.01
SDC2-201ENST00000302190 ZNF844Q08AG5 666 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 SEMA3FQ13275 785 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 AP1ARQ63HQ0 302 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 PALM2Q8IXS6 379 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02□□□□□ -0.01
SDC2-201ENST00000302190 RUNDC3BQ96NL0 473 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 TMEM39BQ9GZU3 492 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 ZWILCHQ9H900 591 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 ADAM22Q9P0K1 906 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 DCTN4Q9UJW0 460 aa15.02□□□□□ -0.01
SDC2-201ENST00000302190 BRCA2P51587 3418 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 F8VZ95 297 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 IGBP1P78318 339 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 ARSHQ5FYA8 562 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 XPO6Q96QU8 1125 aaKnown RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 NR2E1Q9Y466 385 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 DLG4P78352 724 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 IRX4P78413 519 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 FAM167BQ9BTA0 163 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 CALN1Q9BXU9 219 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 CPSF2Q9P2I0 782 aaKnown RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 DUOX1Q9NRD9 1551 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 SRGAP2CP0DJJ0 459 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 QARSP47897 775 aaKnown RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 BBS9Q3SYG4 887 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms