RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 BHMG1C9JSJ3 638 aaPredicted RBP16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 CLDN3O15551 220 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 GJB1P08034 283 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 PPATQ06203 517 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.78■□□□□ 0.283e-7■■■□□ 16.8
CHAF1A-201ENST00000301280 NUP85Q9BW27 656 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 GOLGA6L10A0A0M3HER8 536 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 LRRC71Q8N4P6 559 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 PDCD2LQ9BRP1 358 aa16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
CHAF1A-201ENST00000301280 NR1D1P20393 614 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 LMNB1P20700 586 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 DR1Q01658 176 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 PGM5Q15124 567 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 CCDC26Q8TAB7 109 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 AGO4Q9HCK5 861 aaKnown RBP16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 ANAPC7Q9UJX3 599 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 CNTNAP1P78357 1384 aa16.77■□□□□ 0.28
CHAF1A-201ENST00000301280 HSD17B3P37058 310 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 LRRC14Q15048 493 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 ZBTB41Q5SVQ8 909 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 TARS2Q9BW92 718 aaKnown RBP16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 OLFML3Q9NRN5 406 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 TSKSQ9UJT2 592 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 DAAM1Q9Y4D1 1078 aa16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 BZW2Q9Y6E2 419 aaKnown RBP16.77■□□□□ 0.27
CHAF1A-201ENST00000301280 CES2O00748 559 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 PGK2P07205 417 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 DYNLT1P63172 113 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 IFT88Q13099 833 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 MAPK7Q13164 816 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 TTC31Q49AM3 519 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 ANO5Q75V66 913 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 ANKRD42Q8N9B4 389 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 RNF25Q96BH1 459 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 SCLT1Q96NL6 688 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 TAF1DQ9H5J8 278 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 TTC7AQ9ULT0 858 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 PCDHGC5Q9Y5F6 944 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 MCCD1P59942 119 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 GSTA5Q7RTV2 222 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 NT5DC3Q86UY8 548 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 NXF1Q9UBU9 619 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 CNOT8Q9UFF9 292 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 ZNF536O15090 1300 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 IFNB1P01574 187 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 PLS3P13797 630 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 PPP2R5CQ13362 524 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 EMBQ6PCB8 327 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 MCF2L2Q86YR7 1114 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 TMEM174Q8WUU8 243 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 RFFLQ8WZ73 363 aa16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 POLR3FQ9H1D9 316 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-201ENST00000301280 CD19P15391 556 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 SMAD1Q15797 465 aaKnown RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ICE2Q659A1 982 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 CCDC60Q8IWA6 550 aaPredicted RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 FBXO25Q8TCJ0 367 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 TRAPPC12Q8WVT3 735 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 KCNK9Q9NPC2 374 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 RNF14Q9UBS8 474 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ZNF862O60290 1169 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 KIAA0754O94854 1291 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ANXA13P27216 316 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 PDE6CP51160 858 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 TRAF1Q13077 416 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 OLIG1Q8TAK6 271 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 IFT74Q96LB3 600 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 C10orf88Q9H8K7 445 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 DBR1Q9UK59 544 aaKnown RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ERLIN2O94905 339 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 CCDC172P0C7W6 258 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 PSMC5P62195 406 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 PRKCEQ02156 737 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 DEPTORQ8TB45 409 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 ZNF564Q8TBZ8 553 aaPredicted RBP16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
CHAF1A-201ENST00000301280 O00370 1275 aa16.74■□□□□ 0.27
CHAF1A-201ENST00000301280 CFHP08603 1231 aa16.74■□□□□ 0.27
CHAF1A-201ENST00000301280 PYGMP11217 842 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms