RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 UNC5CO95185 931 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 CETPP11597 493 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 RFC5P40937 340 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 GPC5P78333 572 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 CGB2Q6NT52 195 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 BTNL9Q6UXG8 535 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 MIGA2Q7L4E1 593 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 GSTA5Q7RTV2 222 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 RTFDC1Q9BY42 306 aaPredicted RBP15.69■□□□□ 0.1
COL6A2-201ENST00000300527 DNAJC18Q9H819 358 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ALG13Q9NP73 1137 aaKnown RBP15.69■□□□□ 0.1
COL6A2-201ENST00000300527 NAALADL1Q9UQQ1 740 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 NCANO14594 1321 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ALADP13716 330 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ATF2P15336 505 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ARHGAP4P98171 946 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 QRICH1Q2TAL8 776 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 EPC2Q52LR7 807 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 RHOT2Q8IXI1 618 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 SLAIN2Q9P270 581 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 UBAP1LF5GYI3 381 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 SNUPNO95149 360 aaKnown RBP15.69■□□□□ 0.1
COL6A2-201ENST00000300527 SGPL1O95470 568 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 TTLL1O95922 423 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 IL9RQ01113 521 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF543Q08ER8 600 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ANO7Q6IWH7 933 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 FAM178BQ8IXR5 827 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ART4Q93070 314 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 RNPEPL1Q9HAU8 725 aa15.69■□□□□ 0.1
COL6A2-201ENST00000300527 ADAMTSL3P82987 1691 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 ZBTB5O15062 677 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 OAS1P00973 400 aaKnown RBP15.68■□□□□ 0.1
COL6A2-201ENST00000300527 DLG4P78352 724 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 STRN3Q13033 797 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 TSNAXIP1Q2TAA8 658 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 RNF220Q5VTB9 566 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 ARHGEF19Q8IW93 802 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 FAM13CQ8NE31 585 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF564Q8TBZ8 553 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-201ENST00000300527 PAPOLBQ9NRJ5 636 aaKnown RBP15.68■□□□□ 0.1
COL6A2-201ENST00000300527 CCDC88AQ3V6T2 1871 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 MIF4GDA9UHW6 222 aaKnown RBP15.68■□□□□ 0.1
COL6A2-201ENST00000300527 ODR4Q5SWX8 454 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-201ENST00000300527 CCDC134Q9H6E4 229 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
COL6A2-201ENST00000300527 CYP26A1O43174 497 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 UFL1O94874 794 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 GJB6O95452 261 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 CHRNB2P17787 502 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 DDB1Q16531 1140 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SHROOM1Q2M3G4 852 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SPDYCQ5MJ68 293 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF804AQ7Z570 1209 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 TBC1D10AQ9BXI6 508 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 EMSYQ7Z589 1322 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 GOLGA8IPA6NC78 632 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 GOLGA8JA6NMD2 632 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 DDX39AO00148 427 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SPATA31C1P0DKV0 1188 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 GM2AP17900 193 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 CALB2P22676 271 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 DRG2P55039 364 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 OVGP1Q12889 678 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 TRMT10CQ7L0Y3 403 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 ZC3H18Q86VM9 953 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 UCMAQ8WVF2 138 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SERPINB12Q96P63 405 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 AAASQ9NRG9 546 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 PCYOX1Q9UHG3 505 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 PHTF1Q9UMS5 762 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 NENFQ9UMX5 172 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 USTQ9Y2C2 406 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 LRP5O75197 1615 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SNED1Q8TER0 1413 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 EML1O00423 815 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 BCRP11274 1271 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 TAC1P20366 129 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 PTDSS1P48651 473 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 RWDD2BP57060 319 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SEPT7Q16181 437 aaKnown RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF365Q70YC5 407 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 ANKLE1Q8NAG6 615 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-201ENST00000300527 DNAJC9Q8WXX5 260 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 SYT15Q9BQS2 421 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 NINJ2Q9NZG7 142 aa15.67■□□□□ 0.1
COL6A2-201ENST00000300527 PEX11AO75192 247 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 TTC4O95801 387 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 HSPA6P17066 643 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 PAPOLAP51003 745 aaKnown RBP15.66■□□□□ 0.1
COL6A2-201ENST00000300527 INHBEP58166 350 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms