RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ATXN2Q99700 1313 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SMIM23A6NLE4 172 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TBC1D12O60347 775 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 KIAA0754O94854 1291 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 ALCAMQ13740 583 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 BYSLQ13895 437 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TNIP1Q15025 636 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SIX1Q15475 284 aaPredicted RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SNRNP35Q16560 246 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 NBPF9Q3BBW0 867 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 KCNV1Q6PIU1 500 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 CCDC137Q6PK04 289 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 OGFOD1Q8N543 542 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 HELQQ8TDG4 1101 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TMEM174Q8WUU8 243 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 RPS6KC1Q96S38 1066 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PTPN22Q9Y2R2 807 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TELO2Q9Y4R8 837 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PSME4Q14997 1843 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PFASO15067 1338 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TLDC2A0PJX2 215 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 CCDC169A6NNP5 214 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 RARAP10276 462 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 RPS6P62753 249 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SLC29A2Q14542 456 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PGM5Q15124 567 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 XKR9Q5GH70 373 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 NIPA1Q7RTP0 329 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 LARGE2Q8N3Y3 721 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 ZNF564Q8TBZ8 553 aaPredicted RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 SHC3Q92529 594 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TATDN2Q93075 761 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 PABPC3Q9H361 631 aaKnown RBP14.65□□□□□ -0.06
BCCIP-202ENST00000299130 TBX20Q9UMR3 447 aa14.65□□□□□ -0.06
BCCIP-202ENST00000299130 ZNFX1Q9P2E3 1918 aaKnown RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 SRRM3A6NNA2 597 aaPredicted RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 LYPLA2O95372 231 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 CYP11B1P15538 503 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 CHRNA3P32297 505 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 DRG2P55039 364 aaKnown RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 IFI35P80217 286 aaPredicted RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PPP2R5EQ16537 467 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PRPF38AQ8NAV1 312 aaKnown RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 TMEM161BQ8NDZ6 487 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 TAS1R2Q8TE23 839 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PARD3BQ8TEW8 1205 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 ZNF653Q96CK0 615 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 ST6GALNAC4Q9H4F1 302 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 MTA2O94776 668 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 CYP1A2P05177 515 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 NUDT17P0C025 328 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 GZMAP12544 262 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 FGFR4P22455 802 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 CNGA1P29973 690 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 NPTX2P47972 431 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 ANO5Q75V66 913 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PHLDB2Q86SQ0 1253 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 SPATS2Q86XZ4 545 aaKnown RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 SLC13A5Q86YT5 568 aaPredicted RBP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 C4orf19Q8IY42 314 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 PI4K2AQ9BTU6 479 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 WNT8AQ9H1J5 351 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 AZI2Q9H6S1 392 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.64□□□□□ -0.07
BCCIP-202ENST00000299130 USP20Q9Y2K6 914 aa14.64□□□□□ -0.07
BCCIP-202ENST00000299130 MAPK13O15264 365 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 SPOPO43791 374 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 GRIN3BO60391 1043 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 FSBPO95073 299 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 ASNSP08243 561 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 PAEPP09466 180 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 HNRNPH1P31943 449 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 COILP38432 576 aaPredicted RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 MFAP3P55082 362 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 EIF3BP55884 814 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 MICALCLQ6ZW33 695 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 DDX1Q92499 740 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 TRIM7Q9C029 511 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 ADAM7Q9H2U9 754 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 RASAL2Q9UJF2 1139 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 PSMC5P62195 406 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 SF3A3Q12874 501 aaKnown RBP eCLIP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 SPDYCQ5MJ68 293 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 DENND2CQ68D51 928 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 KRT39Q6A163 491 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 YTHDF3Q7Z739 585 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 EPS8L3Q8TE67 593 aaKnown RBP14.63□□□□□ -0.07
BCCIP-202ENST00000299130 VTI1AQ96AJ9 217 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 WNK4Q96J92 1243 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 SEC16BQ96JE7 1060 aa14.63□□□□□ -0.07
BCCIP-202ENST00000299130 PDGFDQ9GZP0 370 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms