RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 FAM83AQ86UY5 434 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 SYN2Q92777 582 aaPredicted RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 TEPSINQ96N21 525 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 ZNF577Q9BSK1 485 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 WDR11Q9BZH6 1224 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 KCTD10Q9H3F6 313 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PAPOLBQ9NRJ5 636 aaKnown RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 USP15Q9Y4E8 981 aaPredicted RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 A6NHS1 94 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 AHCYL1O43865 530 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 FLOT1O75955 427 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 GCNT3O95395 438 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 FESP07332 822 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 NR2F2P24468 414 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 ZNF131P52739 623 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 CEP55Q53EZ4 464 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 UBAP2Q5T6F2 1119 aaKnown RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 LRRC57Q8N9N7 239 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 RNF25Q96BH1 459 aaPredicted RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 RAB17Q9H0T7 212 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 EPB41L4BQ9H329 900 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
CAGE1-201ENST00000296742 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 ZNF536O15090 1300 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 CENPFP49454 3210 aa13.4□□□□□ -0.26
CAGE1-201ENST00000296742 TCP11X1B4DZS4 312 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 BHMG1C9JSJ3 638 aaPredicted RBP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 LIN7AO14910 233 aaPredicted RBP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 ITGB5P18084 799 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 NMT1P30419 496 aaKnown RBP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 PCK1P35558 622 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 MXRA7P84157 204 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 ARMC3Q5W041 872 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 NUGGCQ68CJ6 796 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 OTUD6AQ7L8S5 288 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 GLG1Q92896 1179 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 PGM2Q96G03 612 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 SNX24Q9Y343 169 aa13.4□□□□□ -0.27
CAGE1-201ENST00000296742 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.27
CAGE1-201ENST00000296742 TMEM150BA6NC51 233 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 TBX3O15119 743 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 SUN1O94901 812 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 SSR1P43307 286 aaKnown RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 CASP4P49662 377 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 SPP2Q13103 211 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 UNC45AQ9H3U1 944 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 SPDYE5A6NIY4 337 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 TBC1D12O60347 775 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 HIP1RO75146 1068 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 PSMD10O75832 226 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 ACTN1P12814 892 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 BNIP1Q12981 228 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 TRAF1Q13077 416 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 ALKBH5Q6P6C2 394 aaKnown RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
CAGE1-201ENST00000296742 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 HSD17B14Q9BPX1 270 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 FEM1BQ9UK73 627 aa13.39□□□□□ -0.27
CAGE1-201ENST00000296742 LRRD1A4D1F6 860 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
CAGE1-201ENST00000296742 CYP3A4P08684 503 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 NUDT17P0C025 328 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 DR1Q01658 176 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 DCAF17Q5H9S7 520 aaPredicted RBP13.38□□□□□ -0.27
CAGE1-201ENST00000296742 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 MYCT1Q8N699 235 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
CAGE1-201ENST00000296742 MAP3K13O43283 966 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 SORBS3O60504 671 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 TBCAO75347 108 aaKnown RBP13.38□□□□□ -0.27
CAGE1-201ENST00000296742 FGFR4P22455 802 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 PTGER2P43116 358 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 TUBP50607 506 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 COG2Q14746 738 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 GALNTL6Q49A17 601 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 FKBP1CQ5VVH2 108 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 FITM2Q8N6M3 262 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 SEC14L1Q92503 715 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 TXLNGYQ9BZA5 131 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms