RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TCHPQ9BT92 498 aa13.27□□□□□ -0.28
HMGB2-201ENST00000296503 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.28
HMGB2-201ENST00000296503 NXF3Q9H4D5 531 aaKnown RBP13.27□□□□□ -0.28
HMGB2-201ENST00000296503 PDZD7Q9H5P4 517 aa13.27□□□□□ -0.28
HMGB2-201ENST00000296503 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.28
HMGB2-201ENST00000296503 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.28
HMGB2-201ENST00000296503 MYH11P35749 1972 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 CDH23Q9H251 3354 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 H0YCG3 227 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 POMCP01189 267 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 ITGB1P05556 798 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 EEF1DP3Q658K8 133 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 HAUS6Q7Z4H7 955 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 APBB1IPQ7Z5R6 666 aaPredicted RBP13.27□□□□□ -0.29
HMGB2-201ENST00000296503 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 SPPL3Q8TCT6 385 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 DDX12PQ92771 950 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 DHX58Q96C10 678 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 GAD1Q99259 594 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 ACO2Q99798 780 aaKnown RBP13.27□□□□□ -0.29
HMGB2-201ENST00000296503 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.29
HMGB2-201ENST00000296503 TBC1D13Q9NVG8 400 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 GIT1Q9Y2X7 761 aa13.27□□□□□ -0.29
HMGB2-201ENST00000296503 RALGAPA2Q2PPJ7 1873 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 MYMKA6NI61 221 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 NT5C1B-RDH14C9J2C7 533 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 ZC3H11AO75152 810 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGB2-201ENST00000296503 FGF18O76093 207 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 PBX3P40426 434 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 AFF1P51825 1210 aaKnown RBP13.26□□□□□ -0.29
HMGB2-201ENST00000296503 KRT17Q04695 432 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 TPRNQ4KMQ1 711 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 MICAL1Q8TDZ2 1067 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
HMGB2-201ENST00000296503 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 STAMQ92783 540 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 NRDE2Q9H7Z3 1164 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 SNTG2Q9NY99 539 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 SPG21Q9NZD8 308 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 PUF60Q9UHX1 559 aaKnown RBP13.26□□□□□ -0.29
HMGB2-201ENST00000296503 TNFSF13BQ9Y275 285 aa13.26□□□□□ -0.29
HMGB2-201ENST00000296503 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 POLR2DO15514 142 aaKnown RBP13.25□□□□□ -0.29
HMGB2-201ENST00000296503 ALDH2P05091 517 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
HMGB2-201ENST00000296503 IDEP14735 1019 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 MLH1P40692 756 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 ZNF131P52739 623 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 BCAR1P56945 870 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 ZNF280BQ86YH2 543 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 FAM178BQ8IXR5 827 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 SLC17A8Q8NDX2 589 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 LRRC27Q9C0I9 530 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
HMGB2-201ENST00000296503 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 K7ENM7 598 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 PPM1AP35813 382 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 MATR3P43243 847 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGB2-201ENST00000296503 AMPD3Q01432 767 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 SASS6Q6UVJ0 657 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 BICD1Q96G01 975 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 CUEDC2Q9H467 287 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
HMGB2-201ENST00000296503 DDHD2O94830 711 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 DNAJB1P25685 340 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
HMGB2-201ENST00000296503 SCNN1GP51170 649 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 UBE3AQ05086 875 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 ZNF568Q3ZCX4 644 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 ZBTB45Q96K62 511 aaPredicted RBP13.24□□□□□ -0.29
HMGB2-201ENST00000296503 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
HMGB2-201ENST00000296503 DNAJB4Q9UDY4 337 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 TBX20Q9UMR3 447 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
HMGB2-201ENST00000296503 MYO7AQ13402 2215 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CARNS1A5YM72 827 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 NR1I2O75469 434 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 GALTP07902 379 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 GAP43P17677 238 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 SCP2P22307 547 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 OSTNP61366 133 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 E2F4Q16254 413 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 HERC4Q5GLZ8 1057 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms