RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 NBPF9Q3BBW0 867 aa20.6■□□□□ 0.89
LSM12-201ENST00000293406 BTBD6Q96KE9 485 aa20.6■□□□□ 0.89
LSM12-201ENST00000293406 CBWD1Q9BRT8 395 aa20.6■□□□□ 0.89
LSM12-201ENST00000293406 NUP85Q9BW27 656 aa20.6■□□□□ 0.89
LSM12-201ENST00000293406 MCM8Q9UJA3 840 aa20.6■□□□□ 0.89
LSM12-201ENST00000293406 NOCTQ9UK39 431 aaKnown RBP20.6■□□□□ 0.89
LSM12-201ENST00000293406 SMCHD1A6NHR9 2005 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 VIL1P09327 827 aaKnown RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 CCDC38Q502W7 563 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 MFSD5Q6N075 450 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 HIBCHQ6NVY1 386 aaPredicted RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 ROPN1BQ9BZX4 212 aaPredicted RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 ROPN1Q9HAT0 212 aaPredicted RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 IPO5O00410 1097 aaKnown RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 ECEL1O95672 775 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 RRP1BQ14684 758 aaKnown RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 SIX1Q15475 284 aaPredicted RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 C1orf220Q5T0J3 134 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 TRPM8Q7Z2W7 1104 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 CPNE8Q86YQ8 564 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 FAM71AQ8IYT1 594 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 XXYLT1Q8NBI6 393 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 ACCSQ96QU6 501 aa20.59■□□□□ 0.89
LSM12-201ENST00000293406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.59■□□□□ 0.896e-6■■■■■ 48.1
LSM12-201ENST00000293406 RBBP6Q7Z6E9 1792 aaKnown RBP20.59■□□□□ 0.89
LSM12-201ENST00000293406 DDX39AO00148 427 aaKnown RBP20.58■□□□□ 0.89
LSM12-201ENST00000293406 CYP26A1O43174 497 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 SLC8A1P32418 973 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 ECE1P42892 770 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 MXI1P50539 228 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 RWDD2BP57060 319 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 ALCAMQ13740 583 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 RASA3Q14644 834 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 B3GNT9Q6UX72 402 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 RNF207Q6ZRF8 634 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 TRMT10CQ7L0Y3 403 aaKnown RBP20.58■□□□□ 0.89
LSM12-201ENST00000293406 CCDC63Q8NA47 563 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 HOMER3Q9NSC5 361 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 HSPBP1Q9NZL4 362 aa20.58■□□□□ 0.89
LSM12-201ENST00000293406 MYH11P35749 1972 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 EZRP15311 586 aaKnown RBP20.58■□□□□ 0.88
LSM12-201ENST00000293406 NF2P35240 595 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 EXOC3L1Q86VI1 746 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 SLC47A2Q86VL8 602 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 PPM1KQ8N3J5 372 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 C12orf50Q8NA57 414 aaPredicted RBP20.58■□□□□ 0.88
LSM12-201ENST00000293406 DYDC1Q8WWB3 177 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 ZNF653Q96CK0 615 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 ACP6Q9NPH0 428 aa20.58■□□□□ 0.88
LSM12-201ENST00000293406 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 CYP1A2P05177 515 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 PDE6CP51160 858 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 DACT2Q5SW24 774 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 C12orf56Q8IXR9 622 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 PLEKHO2Q8TD55 490 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 TMEM117Q9H0C3 514 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 CDC42EP4Q9H3Q1 356 aaKnown RBP20.57■□□□□ 0.88
LSM12-201ENST00000293406 LRRC19Q9H756 370 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 SYNPO2Q9UMS6 1093 aa20.57■□□□□ 0.88
LSM12-201ENST00000293406 TULP1O00294 542 aaPredicted RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 MAPTP10636 758 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 IBSPP21815 317 aaPredicted RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 LONRF1Q17RB8 773 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 FAM133BQ5BKY9 247 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 ZSWIM2Q8NEG5 633 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 TMEM174Q8WUU8 243 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 KREMEN1Q96MU8 473 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 DDX23Q9BUQ8 820 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 ARHGEF10LQ9HCE6 1279 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 GTF3C4Q9UKN8 822 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 MRPL11Q9Y3B7 192 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 ATP6V1G2O95670 118 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 DLATP10515 647 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 FMO1Q01740 532 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 E2F5Q15329 346 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 CSRNP1Q96S65 589 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 POP1Q99575 1024 aaKnown RBP20.56■□□□□ 0.88
LSM12-201ENST00000293406 RIT2Q99578 217 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 UVRAGQ9P2Y5 699 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 SERPINA10Q9UK55 444 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 AFF2P51816 1311 aa20.56■□□□□ 0.88
LSM12-201ENST00000293406 ATRNL1Q5VV63 1379 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 SNX3O60493 162 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 ACSL3O95573 720 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 MFAP3P55082 362 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 OTUD6AQ7L8S5 288 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 ABCF3Q9NUQ8 709 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 WHRNQ9P202 907 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 CD2APQ9Y5K6 639 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 CLDN3O15551 220 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 FKBP1AP62942 108 aaKnown RBP20.55■□□□□ 0.88
LSM12-201ENST00000293406 KRT17Q04695 432 aa20.55■□□□□ 0.88
LSM12-201ENST00000293406 LRRC14Q15048 493 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms