RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 C3orf20Q8ND61 904 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TTC8Q8TAM2 541 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 WWP1Q9H0M0 922 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 RGL1Q9NZL6 768 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 NFAT5O94916 1531 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TRIM49BA6NDI0 452 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SERPINB4P48594 390 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 KDSRQ06136 332 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 INPP5DQ92835 1189 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PKD2L2Q9NZM6 624 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 MCM8Q9UJA3 840 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 K7ERI5 159 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ADRA2BP18089 450 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 GPS1Q13098 491 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 C11orf70Q9BRQ4 267 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 MSTO1Q9BUK6 570 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 GPR108Q9NPR9 543 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ATP10DQ9P241 1426 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 SFI1A8K8P3 1242 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 PRKAB2O43741 272 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 KRT75O95678 551 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 VCAM1P19320 739 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ATP11CQ8NB49 1132 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ARL8AQ96BM9 186 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ARL2BPQ9Y2Y0 163 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 FAM187AA6NFU0 413 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 CASP1P29466 404 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 TYK2P29597 1187 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ALCAMQ13740 583 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 KRT33BQ14525 404 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 UBE2SQ16763 222 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF667Q5HYK9 610 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 AGR3Q8TD06 166 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 FSD1LQ9BXM9 530 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 SLC40A1Q9NP59 571 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 FAM95CA0A1B0GW59 222 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 TCP11X1B4DZS4 312 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 FSBPO95073 299 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 RESP18Q5W5W9 173 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 PASD1Q8IV76 773 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 CDHR1Q96JP9 859 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 CD248Q9HCU0 757 aa11.37□□□□□ -0.59
PKNOX1-201ENST00000291547 GRID2IPA4D2P6 1211 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 KCNA3P22001 575 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 VSNL1P62760 191 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 KIAA1841Q6NSI8 718 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 UNC13DQ70J99 1090 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 OR6B3Q8NGW1 331 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 B4GALNT2Q8NHY0 566 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 CYP26B1Q9NR63 512 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 OCM2P0CE71 109 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SERPINB3P29508 390 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 DMC1Q14565 340 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 NCAPHQ15003 741 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 FAM83BQ5T0W9 1011 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 OLFML2BQ68BL8 750 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 RRM2BQ7LG56 351 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 KANSL2Q9H9L4 492 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 TMCC1O94876 653 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ADD2P35612 726 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 LIFRP42702 1097 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 PEX3P56589 373 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 MAPRE2Q15555 327 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 CCDC137Q6PK04 289 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 STX19Q8N4C7 294 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 OSBP2Q969R2 916 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SH3GL2Q99962 352 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 BFARQ9NZS9 450 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF804BA4D1E1 1349 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 PJA2O43164 708 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 BMP3P12645 472 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 HSPA9P38646 679 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 GCLMP48507 274 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms