RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 MTMR9Q96QG7 549 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 ADPGKQ9BRR6 497 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 PIDD1Q9HB75 910 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 MAN1C1Q9NR34 630 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.55■□□□□ 0.08
TPM1-202ENST00000288398 NOL7Q9UMY1 257 aaKnown RBP15.55■□□□□ 0.08
TPM1-202ENST00000288398 LIMCH1Q9UPQ0 1083 aa15.55■□□□□ 0.08
TPM1-202ENST00000288398 ZNF318Q5VUA4 2279 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 N4BP3O15049 544 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 INPPL1O15357 1258 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 B4GALT5O43286 388 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 TADA2AO75478 443 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 BRD1O95696 1058 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 OR52Z1P0C646 297 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 LIG1P18858 919 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 NUBP1P53384 320 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
TPM1-202ENST00000288398 ORC2Q13416 577 aaPredicted RBP15.54■□□□□ 0.08
TPM1-202ENST00000288398 USP41Q3LFD5 358 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 CCDC83Q8IWF9 413 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 ATOH1Q92858 354 aaPredicted RBP15.54■□□□□ 0.08
TPM1-202ENST00000288398 MARCH5Q9NX47 278 aa15.54■□□□□ 0.08
TPM1-202ENST00000288398 ZMYM2Q9UBW7 1377 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 SF3B1O75533 1304 aaKnown RBP eCLIP15.53■□□□□ 0.089e-6■■■■■ 68.9
TPM1-202ENST00000288398 A0A087WWV3 80 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 CCDC195A0A1B0GUA6 201 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 A0A1B0GUA9 196 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 TEX28O15482 410 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 RFX1P22670 979 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 GBP2P32456 591 aaPredicted RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 HMGN5P82970 282 aaKnown RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 DSC1Q08554 894 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 PRPF4BQ13523 1007 aaKnown RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 PPP2R5AQ15172 486 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 MAPK6Q16659 721 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 AMHR2Q16671 573 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 CYP26C1Q6V0L0 522 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 APBB1IPQ7Z5R6 666 aaPredicted RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 CATSPER3Q86XQ3 398 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 LLPHQ9BRT6 129 aaKnown RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 POLR3CQ9BUI4 534 aaPredicted RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 TMEM60Q9H2L4 133 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 FOXP1Q9H334 677 aaPredicted RBP15.53■□□□□ 0.08
TPM1-202ENST00000288398 GPRC5CQ9NQ84 441 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 KLK14Q9P0G3 267 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 ADAM28Q9UKQ2 775 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
TPM1-202ENST00000288398 LILRB3O75022 631 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 RBM25P49756 843 aaKnown RBP15.52■□□□□ 0.08
TPM1-202ENST00000288398 DSG1Q02413 1049 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 TDGQ13569 410 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 ZNF174Q15697 407 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 FUT10Q6P4F1 479 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 POTEGQ6S5H5 508 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 PADI6Q6TGC4 694 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 TAS1R1Q7RTX1 841 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 CMASQ8NFW8 434 aaPredicted RBP15.52■□□□□ 0.08
TPM1-202ENST00000288398 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.08
TPM1-202ENST00000288398 SMG7Q92540 1137 aaKnown RBP15.52■□□□□ 0.08
TPM1-202ENST00000288398 ZSCAN31Q96LW9 406 aaPredicted RBP15.52■□□□□ 0.08
TPM1-202ENST00000288398 RAB34Q9BZG1 259 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 PLEKHA4Q9H4M7 779 aa15.52■□□□□ 0.08
TPM1-202ENST00000288398 WNT7AO00755 349 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 MED24O75448 989 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 PDGFBP01127 241 aaPredicted RBP15.51■□□□□ 0.07
TPM1-202ENST00000288398 PRKCBP05771 671 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 MYBP10242 640 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 RPA1P27694 616 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 CCT6AP40227 531 aaKnown RBP15.51■□□□□ 0.07
TPM1-202ENST00000288398 TCF15Q12870 199 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 HSP90AA2PQ14568 343 aaPredicted RBP15.51■□□□□ 0.07
TPM1-202ENST00000288398 TTC38Q5R3I4 469 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 KIAA0319Q5VV43 1072 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 PALB2Q86YC2 1186 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 HDAC7Q8WUI4 952 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 RXFP1Q9HBX9 757 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 MIOSQ9NXC5 875 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 IGSF9Q9P2J2 1179 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 STK24Q9Y6E0 443 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 ZDBF2Q9HCK1 2354 aa15.51■□□□□ 0.07
TPM1-202ENST00000288398 CLUHO75153 1309 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 STK25O00506 426 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 SPATA31D3P0C874 917 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 CYP11B2P19099 503 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 MUTP22033 750 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 NAMPTP43490 491 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 EFNA5P52803 228 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 TUSC3Q13454 348 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 CDCA2Q69YH5 1023 aaPredicted RBP15.5■□□□□ 0.07
TPM1-202ENST00000288398 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
TPM1-202ENST00000288398 SPATA31D4Q6ZUB0 917 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 GPR65Q8IYL9 337 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms