RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SPOPLQ6IQ16 392 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 GPAT2Q6NUI2 795 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 METTL7BQ6UX53 244 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 CTNNBL1Q8WYA6 563 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 DHX33Q9H6R0 707 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 C17orf75Q9HAS0 396 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 DMGDHQ9UI17 866 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 AGO2Q9UKV8 859 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 KCNH4Q9UQ05 1017 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 CEP104O60308 925 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 ERLIN1O75477 346 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 BRDTQ58F21 947 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-201ENST00000279247 FAM160B1Q5W0V3 765 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
CAPN1-201ENST00000279247 PEX26Q7Z412 305 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 PHLDB2Q86SQ0 1253 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 PRPF31Q8WWY3 499 aaKnown RBP19.38■□□□□ 0.69
CAPN1-201ENST00000279247 AGPAT1Q99943 283 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 FUT8Q9BYC5 575 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 PCDHGC5Q9Y5F6 944 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 SLC25A27O95847 323 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 EDNRBP24530 442 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 TMEM132AQ24JP5 1023 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 BEND6Q5SZJ8 279 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-201ENST00000279247 FBXL13Q8NEE6 735 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 MSTO1Q9BUK6 570 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 HAPLN2Q9GZV7 340 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 RAB20Q9NX57 234 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 SOCS7O14512 581 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 ATG7O95352 703 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 MYBL2P10244 700 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 OSTNP61366 133 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 SNAPC2Q13487 334 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 CAPSQ13938 189 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 MEI1Q5TIA1 1274 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 TPCN2Q8NHX9 752 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 NLRP4Q96MN2 994 aa19.38■□□□□ 0.69
CAPN1-201ENST00000279247 CCDC172P0C7W6 258 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 CFAP221Q4G0U5 840 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 ADAT2Q7Z6V5 191 aaKnown RBP19.37■□□□□ 0.69
CAPN1-201ENST00000279247 KLHL7Q8IXQ5 586 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 RNF149Q8NC42 400 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 PPP1R13LQ8WUF5 828 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 NT5C1BQ96P26 610 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 FTLP02792 175 aaPredicted RBP19.37■□□□□ 0.69
CAPN1-201ENST00000279247 GRM1Q13255 1194 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 PRPF4BQ13523 1007 aaKnown RBP19.37■□□□□ 0.69
CAPN1-201ENST00000279247 SCARA3Q6AZY7 606 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 NOP9Q86U38 636 aaKnown RBP19.37■□□□□ 0.69
CAPN1-201ENST00000279247 RHPN2Q8IUC4 686 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 OLIG1Q8TAK6 271 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 TMEM8AQ9HCN3 771 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 RAB21Q9UL25 225 aa19.37■□□□□ 0.69
CAPN1-201ENST00000279247 ESYT3A0FGR9 886 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 MMEP08473 750 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 C10orf76Q5T2E6 689 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 LDLRAD1Q5T700 205 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 SLC30A5Q8TAD4 765 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 ZNF516Q92618 1163 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 AP1M1Q9BXS5 423 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 ARID2Q68CP9 1835 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 ZSCAN5CA6NGD5 496 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-201ENST00000279247 BUB1BO60566 1050 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-201ENST00000279247 C2CD6Q53TS8 623 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 NAA35Q5VZE5 725 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 CST9Q5W186 159 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 GPR20Q99678 358 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 GBA2Q9HCG7 927 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-201ENST00000279247 PTPRJQ12913 1337 aa19.36■□□□□ 0.69
CAPN1-201ENST00000279247 PDHXO00330 501 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CCDC70Q6NSX1 233 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 HVCN1Q96D96 273 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 RBAKQ9NYW8 714 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CTTNBP2NLQ9P2B4 639 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 PHACTR2O75167 634 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CLCN3P51790 818 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 GYS2P54840 703 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 MFAP3P55082 362 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 LLGL1Q15334 1064 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 PCDHB18PQ96TA0 734 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 KRT12Q99456 494 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 MPHOSPH6Q99547 160 aaKnown RBP19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CCL15-CCL14A0A0B4J2E2 113 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 A0A0U1RQG5 324 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-201ENST00000279247 KIF4AO95239 1232 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 ARL2P36404 184 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 TNFSF9P41273 254 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 NAMPTP43490 491 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 FAM193AP78312 1265 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CCL15Q16663 113 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 CELF3Q5SZQ8 465 aaKnown RBP19.35■□□□□ 0.69
CAPN1-201ENST00000279247 MFSD14AQ96MC6 490 aa19.35■□□□□ 0.69
CAPN1-201ENST00000279247 PIK3CAP42336 1068 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 IFI16Q16666 785 aaKnown RBP19.34■□□□□ 0.69
CAPN1-201ENST00000279247 C8orf74Q6P047 294 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 EPS8L1Q8TE68 723 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 RPGRIP1Q96KN7 1286 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 EVPLQ92817 2033 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 ZC3H4Q9UPT8 1303 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms