RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TNIP2Q8NFZ5 429 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
UBR3-201ENST00000272793 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.256e-7■□□□□ 10.3
UBR3-201ENST00000272793 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.25
UBR3-201ENST00000272793 ARL2BPQ9Y2Y0 163 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 RHPN2Q8IUC4 686 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 E7EWF7 191 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 MARK3P27448 753 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 ATP11CQ8NB49 1132 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 APPBP2Q92624 585 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 C8orf37Q96NL8 207 aa16.64■□□□□ 0.25
UBR3-201ENST00000272793 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.25
UBR3-201ENST00000272793 ARHGDIBP52566 201 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 GTF2H3Q13889 308 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 FOXP3Q9BZS1 431 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 KRT31Q15323 416 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 TERF2Q15554 542 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 CYP4A22Q5TCH4 519 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 ANKS6Q68DC2 871 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 MRPL48Q96GC5 212 aaKnown RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 PNMA8BQ9ULN7 279 aaPredicted RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 SLC9A6Q92581 669 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 RMDN1Q96DB5 314 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 KIF2CQ99661 725 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 NRBP2Q9NSY0 501 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 KRT38O76015 456 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 WDR60Q8WVS4 1066 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 GCOM2Q9BZD3 368 aaPredicted RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 FAM47E-STBD1D6RA91 191 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 ETNK1Q9HBU6 452 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 ZBTB22O15209 634 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 CTIFO43310 598 aaKnown RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 HNMTP50135 292 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 TAF5Q15542 800 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 DGKKQ5KSL6 1271 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 KDELC2Q7Z4H8 507 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 FKBP14Q9NWM8 211 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 ZNF624Q9P2J8 865 aaPredicted RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 DFFAO00273 331 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 CLIC2O15247 247 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 TTC13Q8NBP0 860 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 RSPH1Q8WYR4 309 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 RPF1Q9H9Y2 349 aaKnown RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 C20orf96Q9NUD7 363 aaPredicted RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 KIAA1024Q9UPX6 916 aa16.63■□□□□ 0.25
UBR3-201ENST00000272793 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
UBR3-201ENST00000272793 SEMA3FQ13275 785 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 LRRC31Q6UY01 552 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 ARL10Q8N8L6 244 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 HIBADHP31937 336 aaKnown RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 STARP49675 285 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 NME3Q13232 169 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 ANKRD40Q6AI12 368 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 POLR1BQ9H9Y6 1135 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 UVRAGQ9P2Y5 699 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 SPASTQ9UBP0 616 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 HAUS5O94927 633 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 ALBP02768 609 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 CLUP10909 449 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 IKBIPQ70UQ0 350 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 PEG10Q86TG7 708 aaKnown RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 MTA3Q9BTC8 594 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 GGT7Q9UJ14 662 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 MAST3O60307 1309 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 DPYDQ12882 1025 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 RABGAP1LQ5R372 815 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 PIK3CDO00329 1044 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 NR2F2P24468 414 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 MAGOHP61326 146 aaKnown RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 IFNEQ86WN2 208 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 JADE3Q92613 823 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 NHEJ1Q9H9Q4 299 aaPredicted RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 COPG2Q9UBF2 871 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 PSMD12O00232 456 aaPredicted RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 PNMA6AP0CW24 399 aaPredicted RBP16.62■□□□□ 0.25
UBR3-201ENST00000272793 HS6ST3Q8IZP7 471 aa16.62■□□□□ 0.25
UBR3-201ENST00000272793 ZNF839A8K0R7 811 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 AP3D1O14617 1153 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 N6AMT1Q9Y5N5 214 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 CCDC22O60826 627 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 HSPA2P54652 639 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 ARL4CP56559 192 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 TTC23Q5W5X9 447 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 FBXW10Q5XX13 1052 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms