RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 C10orf76Q5T2E6 689 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 NOP9Q86U38 636 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 LRRC71Q8N4P6 559 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 TMEM8AQ9HCN3 771 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 LUC7LQ9NQ29 371 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 TCP1P17987 556 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 LIG4P49917 911 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 CKAP4Q07065 602 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 SLC47A2Q86VL8 602 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 SLC7A3Q8WY07 619 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 AGPAT1Q99943 283 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 LRRC1Q9BTT6 524 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 THAP2Q9H0W7 228 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 RBM12Q9NTZ6 932 aaKnown RBP25.04■■□□□ 1.6
RAB40B-201ENST00000269347 COG5Q9UP83 839 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 STYXL1Q9Y6J8 313 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 PLXNB2O15031 1838 aa25.04■■□□□ 1.6
RAB40B-201ENST00000269347 CYP26A1O43174 497 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 BRD3Q15059 726 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 GPR162Q16538 588 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 TMC2Q8TDI7 906 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 PRPF31Q8WWY3 499 aaKnown RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 SLC10A4Q96EP9 437 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 PDE11AQ9HCR9 933 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 ARFGAP3Q9NP61 516 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 SEPT11Q9NVA2 429 aaKnown RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 DMGDHQ9UI17 866 aaKnown RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 NOCTQ9UK39 431 aaKnown RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 MGAMO43451 1857 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 MAFO75444 373 aaPredicted RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 USP8P40818 1118 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 NAMPTP43490 491 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 GPC3P51654 580 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 SNAPC2Q13487 334 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 TAF3Q5VWG9 929 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 C15orf39Q6ZRI6 1047 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 PSPC1Q8WXF1 523 aaKnown RBP25.03■■□□□ 1.6
RAB40B-201ENST00000269347 CLEC11AQ9Y240 323 aa25.03■■□□□ 1.6
RAB40B-201ENST00000269347 ANXA13P27216 316 aa25.02■■□□□ 1.6
RAB40B-201ENST00000269347 FAM71AQ8IYT1 594 aa25.02■■□□□ 1.6
RAB40B-201ENST00000269347 TXLNBQ8N3L3 684 aa25.02■■□□□ 1.6
RAB40B-201ENST00000269347 EPS8L1Q8TE68 723 aa25.02■■□□□ 1.6
RAB40B-201ENST00000269347 RAB20Q9NX57 234 aa25.02■■□□□ 1.6
RAB40B-201ENST00000269347 BTBD19C9JJ37 291 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 RPUSD2Q8IZ73 545 aaKnown RBP25.01■■□□□ 1.59
RAB40B-201ENST00000269347 DEPTORQ8TB45 409 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 SLC35G2Q8TBE7 412 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 SHC3Q92529 594 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 ANKFY1Q9P2R3 1169 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 STXBP5LQ9Y2K9 1186 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 K7ERI5 159 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 LGR5O75473 907 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 TNFAIP3P21580 790 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 SLC7A5Q01650 507 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 PLCB4Q15147 1175 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 SPOPLQ6IQ16 392 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 WDR93Q6P2C0 686 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 FBXL13Q8NEE6 735 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 MORC4Q8TE76 937 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 HNRNPLLQ8WVV9 542 aaKnown RBP25.01■■□□□ 1.59
RAB40B-201ENST00000269347 GLG1Q92896 1179 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 PLEKHA4Q9H4M7 779 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 AGO2Q9UKV8 859 aaKnown RBP25.01■■□□□ 1.59
RAB40B-201ENST00000269347 L1RE1Q9UN81 338 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 ADGRA2Q96PE1 1338 aa25.01■■□□□ 1.59
RAB40B-201ENST00000269347 EXTL3O43909 919 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 RFX1P22670 979 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 CETN1Q12798 172 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 MAMDC4Q6UXC1 1216 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 SLFN11Q7Z7L1 901 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 VPS36Q86VN1 386 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 BRI3BPQ8WY22 251 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 SPATA33Q96N06 139 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 NRBP2Q9NSY0 501 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 PDHXO00330 501 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 KIF4AO95239 1232 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 VNN1O95497 513 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 PIGRP01833 764 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 TDRD10Q5VZ19 366 aaKnown RBP25■■□□□ 1.59
RAB40B-201ENST00000269347 MMGT1Q8N4V1 131 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 ZMYND15Q9H091 742 aa25■■□□□ 1.59
RAB40B-201ENST00000269347 NCANO14594 1321 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 ZNF233A6NK53 670 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 MAP2K7O14733 419 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 BUB1BO60566 1050 aaPredicted RBP24.99■■□□□ 1.59
RAB40B-201ENST00000269347 MMEP08473 750 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 TXNP10599 105 aaKnown RBP24.99■■□□□ 1.59
RAB40B-201ENST00000269347 TNFSF9P41273 254 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 FAM160B1Q5W0V3 765 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 KCNN1Q92952 543 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 MROH8Q9H579 483 aa24.99■■□□□ 1.59
RAB40B-201ENST00000269347 ADCY3O60266 1144 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 RFC5P40937 340 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 CLDN10P78369 228 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 FMO1Q01740 532 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 STRN3Q13033 797 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 ARMCX2Q7L311 632 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 DHX37Q8IY37 1157 aaKnown RBP24.98■■□□□ 1.59
RAB40B-201ENST00000269347 GDAP1L1Q96MZ0 367 aa24.98■■□□□ 1.59
RAB40B-201ENST00000269347 UBXN6Q9BZV1 441 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms