RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 KREMEN1Q96MU8 473 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 CAPS2Q9BXY5 557 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SLITRK6Q9H5Y7 841 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 FAM155AB1AL88 458 aaPredicted RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 MAPK13O15264 365 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 DAPK3O43293 454 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 CLSTN1O94985 981 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 ADSSP30520 456 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 COPB2P35606 906 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 RHOT2Q8IXI1 618 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 CCDC26Q8TAB7 109 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 TMEM174Q8WUU8 243 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 ELMO3Q96BJ8 720 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 RNPC3Q96LT9 517 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 PCDHB18PQ96TA0 734 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 TRIM51Q9BSJ1 452 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 MOV10L1Q9BXT6 1211 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 RABEP2Q9H5N1 569 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 ACP6Q9NPH0 428 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 CHORDC1Q9UHD1 332 aaPredicted RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 RSPH14Q9UHP6 348 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 LCMT1Q9UIC8 334 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 TELO2Q9Y4R8 837 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 BHMG1C9JSJ3 638 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 CHRNB2P17787 502 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 IRAK1P51617 712 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ZNF157P51786 506 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 SMTNP53814 917 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 SNRPFP62306 86 aaKnown RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 PRKG1Q13976 671 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 SKIDA1Q1XH10 827 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 RGMBQ6NW40 437 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 MAP4K3Q8IVH8 894 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 CYP26A1O43174 497 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 NR3C2P08235 984 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 HSD17B3P37058 310 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ATP1A2P50993 1020 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 AADACL2Q6P093 401 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 SLC17A8Q8NDX2 589 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ALG3Q92685 438 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 TRIM31Q9BZY9 425 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 NOCTQ9UK39 431 aaKnown RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 RRP15Q9Y3B9 282 aaKnown RBP13.9□□□□□ -0.18
CPSF6-201ENST00000266679 PCDHA10Q9Y5I2 948 aa13.9□□□□□ -0.18
CPSF6-201ENST00000266679 ZNF862O60290 1169 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 MMEP08473 750 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 MAP2K2P36507 400 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 MARCKSL1P49006 195 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 HMGCS2P54868 508 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 BACE1P56817 501 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 GPC5P78333 572 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 UAP1Q16222 522 aaPredicted RBP13.89□□□□□ -0.19
CPSF6-201ENST00000266679 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 SLC39A4Q6P5W5 647 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 VSIG10LQ86VR7 867 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 CD302Q8IX05 232 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 FAM71AQ8IYT1 594 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 EIF1ADQ8N9N8 165 aaKnown RBP13.89□□□□□ -0.19
CPSF6-201ENST00000266679 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPSF6-201ENST00000266679 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 CARD9Q9H257 536 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 SEPT9Q9UHD8 586 aaPredicted RBP13.89□□□□□ -0.19
CPSF6-201ENST00000266679 PNMA2Q9UL42 364 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 DIS3Q9Y2L1 958 aaKnown RBP13.89□□□□□ -0.19
CPSF6-201ENST00000266679 ALG6Q9Y672 507 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
CPSF6-201ENST00000266679 RTN2O75298 545 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 CNGA1P29973 690 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 FLT3P36888 993 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 MFAP3P55082 362 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 SKOR1P84550 965 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 PDCLQ13371 301 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 MESDQ14696 234 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 KRT39Q6A163 491 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 C11orf63Q6NUN7 778 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 SRLQ86TD4 932 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms