RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 NOLC1Q14978 699 aaKnown RBP eCLIP13.72□□□□□ -0.219e-7■■■□□ 16.9
CLNS1A-201ENST00000263309 SURF1Q15526 300 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 FAM109BQ6ICB4 259 aaPredicted RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 ZBTB33Q86T24 672 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 KCNN1Q92952 543 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 TARS2Q9BW92 718 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 CCDC113Q9H0I3 377 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 MTMR10Q9NXD2 777 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 DACH1Q9UI36 760 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 IPPQ9Y573 584 aa13.72□□□□□ -0.21
CLNS1A-201ENST00000263309 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 THP07101 528 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 CLTAP09496 248 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 HARSP12081 509 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 RABGGTBP53611 331 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 HTRA4P83105 476 aaPredicted RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 PPP2R3AQ06190 1150 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 MAP4K3Q8IVH8 894 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 NOC3LQ8WTT2 800 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 C11orf84Q9BUA3 381 aaPredicted RBP13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 SLC39A2Q9NP94 309 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
CLNS1A-201ENST00000263309 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.22
CLNS1A-201ENST00000263309 OGTO15294 1046 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 B4GALT5O43286 388 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 MGEA5O60502 916 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 CA3P07451 260 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 GARTP22102 1010 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 GRM5P41594 1212 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 KNOP1Q1ED39 458 aaKnown RBP13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 PAN2Q504Q3 1202 aaKnown RBP13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 ZNF507Q8TCN5 953 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 GOLPH3LQ9H4A5 285 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 AGO2Q9UKV8 859 aaKnown RBP13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 SSX2IPQ9Y2D8 614 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 FRMD4BQ9Y2L6 1034 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 GDAQ9Y2T3 454 aa13.7□□□□□ -0.22
CLNS1A-201ENST00000263309 TRAPPC3O43617 180 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 PIGRP01833 764 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 PAX3P23760 479 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 CTNNB1P35222 781 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 MCL1Q07820 350 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 DPYDQ12882 1025 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 AMHR2Q16671 573 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 TRIML1Q8N9V2 468 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 FBXO22Q8NEZ5 403 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 ENGASEQ8NFI3 743 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 DDX27Q96GQ7 796 aaKnown RBP13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 UROC1Q96N76 676 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 SNTG2Q9NY99 539 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 VCANP13611 3396 aa13.69□□□□□ -0.22
CLNS1A-201ENST00000263309 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 ARHGEF37A1IGU5 675 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 ZNF233A6NK53 670 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 PSMA7O14818 248 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 OFD1O75665 1012 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 IL18RAPO95256 599 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 FGFR1P11362 822 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 AKAP5P24588 427 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 BMPR1AP36894 532 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 OSTNP61366 133 aa13.68□□□□□ -0.22
CLNS1A-201ENST00000263309 GRIK3Q13003 919 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms